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Package Usage: pypi: probeinterface
Python package to handle probe layout, geometry and wiring to device.
20 versions
Latest release: 11 months ago
4 dependent packages
36,189 downloads last month
View more package details: https://packages.ecosyste.ms/registries/pypi.org/packages/probeinterface
Dependent Repos 13
catalystneuro/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats- * requirements_testing.txt
Size: 108 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
CSC-UW/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.14 pyproject.toml
Size: 58.8 MB - Last synced: 4 months ago - Pushed: 4 months ago
apdavison/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats- * requirements_testing.txt
Size: 108 MB - Last synced: 15 days ago - Pushed: 16 days ago
samuelgarcia/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats- * requirements_testing.txt
Size: 108 MB - Last synced: about 1 month ago - Pushed: about 2 months ago
JuliaSprenger/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats- * requirements_testing.txt
Size: 108 MB - Last synced: 10 months ago - Pushed: 10 months ago
SpikeInterface/spiketutorials
Tutorials for using SpikeInterface on extracellular datasets.- * Official_Tutorial_SI_0.90_Aug2021/requirements.txt
- * old_api/Cambridge_Neurotech_Webinar_Apr2021/requirements.txt
- >=0.2.10 Official_Tutorial_SI_0.95_Sep2022/environment.yml
- >=0.2.10 Official_Tutorial_SI_0.96_Oct22/environment.yml
- * Official_Tutorial_SI_0.98_Oct23/environment.yml
- * Official_Tutorial_SI_0.99_Nov23/environment.yml
Size: 13.8 MB - Last synced: 7 months ago - Pushed: 7 months ago
caniko/spikeinterface_poetry
Poetry packaging with extras for working with spikeinterface- 0.2.9 poetry.lock
- ^0.2.6 pyproject.toml
Size: 427 KB - Last synced: 21 days ago - Pushed: about 1 year ago
carlacodes/spikeinterface3cg
Implementation of semi-automatic spike interface pipeline on tungsten WARP data for the myriad cluster- ==0.2.9 requirements.txt
Size: 360 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
alejoe91/axon_velocity
Python package to reconstruct axonal branches from high-density micro-electrode arrays- * requirements.txt
- * requirements_full.txt
Size: 39.1 MB - Last synced: 16 days ago - Pushed: over 2 years ago
chyumin/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.10 requirements.txt
Size: 41.5 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
yger/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.16 pyproject.toml
Size: 60.8 MB - Last synced: about 1 month ago - Pushed: about 1 month ago
easy-electrophysiology/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats- * requirements_testing.txt
Size: 108 MB - Last synced: 2 months ago - Pushed: 2 months ago
khl02007/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.3 requirements.txt
Size: 50.8 MB - Last synced: 12 months ago - Pushed: 12 months ago
vishalbelsare/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.9 requirements.txt
Size: 3.45 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
catalystneuro/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.16 pyproject.toml
Size: 60 MB - Last synced: 23 days ago - Pushed: 23 days ago
open-ephys-plugins/channel-map-generator
Automatically generate Channel Map config files using the `probeinterface` library- * requirements.txt
Size: 458 KB - Last synced: 25 days ago - Pushed: over 2 years ago
maurotoro/ephys_helpers
Some code for spike sorting with the help of Spikeinterface and magick.- * requirements.txt
Size: 44.9 KB - Last synced: 10 months ago - Pushed: almost 2 years ago
carlacodes/phyplottingproject2
workspace to plot and visualise the outputs of phy (post myriad spike sorting)- ==0.2.9 requirements.txt
Size: 10.2 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
stephprince/singer-lab-to-nwb
- ==0.2.9 requirements.txt
Size: 3.29 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
JulesLebert/spikesorting_scripts
Scripts to run spikesorting pipeline with spike interface- 0.2.15 poetry.lock
Size: 1.88 MB - Last synced: 29 days ago - Pushed: 29 days ago
Jad-Selman/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.14 pyproject.toml
Size: 42.4 MB - Last synced: 10 months ago - Pushed: over 1 year ago
ActiveBrainAtlas2/nwb
Conversion tools for Data Conversion and Curation into NWB format- ==0.2.9 requirements.txt
Size: 177 KB - Last synced: 12 months ago - Pushed: about 1 year ago
mouhaahmet/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.9 requirements.txt
Size: 3.68 MB - Last synced: 10 months ago - Pushed: almost 2 years ago
josephchengyx/spikeinterface Fork of grero/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.17 pyproject.toml
Size: 55.7 MB - Last synced: 10 months ago - Pushed: 10 months ago
gviejo/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.16 pyproject.toml
Size: 56.3 MB - Last synced: 8 months ago - Pushed: 8 months ago
chris-langfield/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.17 pyproject.toml
Size: 59.1 MB - Last synced: 2 months ago - Pushed: 2 months ago
essink/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats- * requirements_testing.txt
Size: 105 MB - Last synced: 9 months ago - Pushed: over 1 year ago
jup36/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.9 requirements.txt
Size: 3.59 MB - Last synced: 9 months ago - Pushed: about 2 years ago
Chetank99/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.17 pyproject.toml
Size: 55.4 MB - Last synced: 8 months ago - Pushed: 8 months ago
mzabolocki/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.14 pyproject.toml
Size: 42.1 MB - Last synced: about 1 month ago - Pushed: 2 months ago
munahaf/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.17 pyproject.toml
Size: 55.6 MB - Last synced: 8 months ago - Pushed: 8 months ago
alejoe91/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.17 pyproject.toml
Size: 60.5 MB - Last synced: 1 day ago - Pushed: 1 day ago
zm711/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.17 pyproject.toml
Size: 60.4 MB - Last synced: about 5 hours ago - Pushed: about 10 hours ago
h-mayorquin/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.16 pyproject.toml
Size: 60.5 MB - Last synced: about 24 hours ago - Pushed: 1 day ago
SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.- >=0.2.17 pyproject.toml
Size: 60.2 MB - Last synced: 7 days ago - Pushed: 7 days ago
neuroinformatics-unit/extracellular-ephys-analysis-course-2023
Covering how to build electrophysiology pipelines with SpikeInterface- ==0.2.18 requirements.txt
Size: 103 MB - Last synced: 7 months ago - Pushed: 7 months ago
AllenInstitute/npc_sessions
Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.- ==0.2.17 requirements.txt
Size: 28.8 MB - Last synced: about 2 hours ago - Pushed: 1 day ago
YaleMRRC/calPrep
- ==0.2.9 installationFiles/environment.yml
Size: 207 KB - Last synced: 4 months ago - Pushed: over 1 year ago
AntonioST/NeuroCarto
A web-based, neural probe channel map editor for the Neuropixels probe.- * requirements-opt.txt
Size: 2.77 MB - Last synced: about 15 hours ago - Pushed: about 15 hours ago
BeNeuroLab/beneuro_experimental_data_organization
Code for checking, moving, and processing the data recorded in the lab- 0.2.20 poetry.lock
Size: 345 KB - Last synced: about 1 month ago - Pushed: about 1 month ago
mcrewcow/fetal_retina_PODs_Soucy_Kriukov
- =0.2.20=pypi_0 requirements.txt
Size: 16.3 MB - Last synced: 1 day ago - Pushed: 1 day ago
NxNiki/NWBExamples
- 0.2.21 poetry.lock
Size: 1.82 MB - Last synced: 2 months ago - Pushed: 2 months ago
JohnStout/caiman_fastplotlib_notebooks
Jupyter-lab toolbox to aid in calcium_imaging analysis/visualization using CaImAn and fastplotlib- ==0.2.20 environment.yml
Size: 210 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
JoeZiminski/ephysworking
General scripts for ephys- * pyproject.toml
Size: 23.4 KB - Last synced: 19 days ago - Pushed: 20 days ago
AllenNeuralDynamics/aind-ephys-transformation
Code to compress ephys data- ==0.2.21 pyproject.toml
Size: 592 KB - Last synced: 6 days ago - Pushed: 14 days ago
USArhythms/ingestion_scripts
- ==0.2.9 requirements.txt
Size: 235 KB - Last synced: about 5 hours ago - Pushed: about 6 hours ago