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Package Usage: pypi: probeinterface

Python package to handle probe layout, geometry and wiring to device.
20 versions
Latest release: 11 months ago
4 dependent packages
36,189 downloads last month

View more package details: https://packages.ecosyste.ms/registries/pypi.org/packages/probeinterface

Dependent Repos 13

catalystneuro/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
  • * requirements_testing.txt

Size: 108 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

CSC-UW/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.14 pyproject.toml

Size: 58.8 MB - Last synced: 4 months ago - Pushed: 4 months ago

apdavison/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
  • * requirements_testing.txt

Size: 108 MB - Last synced: 15 days ago - Pushed: 16 days ago

samuelgarcia/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
  • * requirements_testing.txt

Size: 108 MB - Last synced: about 1 month ago - Pushed: about 2 months ago

JuliaSprenger/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
  • * requirements_testing.txt

Size: 108 MB - Last synced: 10 months ago - Pushed: 10 months ago

SpikeInterface/spiketutorials
Tutorials for using SpikeInterface on extracellular datasets.
  • * Official_Tutorial_SI_0.90_Aug2021/requirements.txt
  • * old_api/Cambridge_Neurotech_Webinar_Apr2021/requirements.txt
  • >=0.2.10 Official_Tutorial_SI_0.95_Sep2022/environment.yml
  • >=0.2.10 Official_Tutorial_SI_0.96_Oct22/environment.yml
  • * Official_Tutorial_SI_0.98_Oct23/environment.yml
  • * Official_Tutorial_SI_0.99_Nov23/environment.yml

Size: 13.8 MB - Last synced: 7 months ago - Pushed: 7 months ago

caniko/spikeinterface_poetry
Poetry packaging with extras for working with spikeinterface
  • 0.2.9 poetry.lock
  • ^0.2.6 pyproject.toml

Size: 427 KB - Last synced: 21 days ago - Pushed: about 1 year ago

carlacodes/spikeinterface3cg
Implementation of semi-automatic spike interface pipeline on tungsten WARP data for the myriad cluster
  • ==0.2.9 requirements.txt

Size: 360 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

alejoe91/axon_velocity
Python package to reconstruct axonal branches from high-density micro-electrode arrays
  • * requirements.txt
  • * requirements_full.txt

Size: 39.1 MB - Last synced: 16 days ago - Pushed: over 2 years ago

chyumin/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.10 requirements.txt

Size: 41.5 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

yger/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.16 pyproject.toml

Size: 60.8 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

easy-electrophysiology/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
  • * requirements_testing.txt

Size: 108 MB - Last synced: 2 months ago - Pushed: 2 months ago

khl02007/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.3 requirements.txt

Size: 50.8 MB - Last synced: 12 months ago - Pushed: 12 months ago

vishalbelsare/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.9 requirements.txt

Size: 3.45 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

catalystneuro/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.16 pyproject.toml

Size: 60 MB - Last synced: 23 days ago - Pushed: 23 days ago

007gzs/test
  • * requirements.txt

Size: 1.6 MB - Last synced: 5 months ago - Pushed: 5 months ago

open-ephys-plugins/channel-map-generator
Automatically generate Channel Map config files using the `probeinterface` library
  • * requirements.txt

Size: 458 KB - Last synced: 25 days ago - Pushed: over 2 years ago

maurotoro/ephys_helpers
Some code for spike sorting with the help of Spikeinterface and magick.
  • * requirements.txt

Size: 44.9 KB - Last synced: 10 months ago - Pushed: almost 2 years ago

carlacodes/phyplottingproject2
workspace to plot and visualise the outputs of phy (post myriad spike sorting)
  • ==0.2.9 requirements.txt

Size: 10.2 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago

stephprince/singer-lab-to-nwb
  • ==0.2.9 requirements.txt

Size: 3.29 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

JulesLebert/spikesorting_scripts
Scripts to run spikesorting pipeline with spike interface
  • 0.2.15 poetry.lock

Size: 1.88 MB - Last synced: 29 days ago - Pushed: 29 days ago

Jad-Selman/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.14 pyproject.toml

Size: 42.4 MB - Last synced: 10 months ago - Pushed: over 1 year ago

ActiveBrainAtlas2/nwb
Conversion tools for Data Conversion and Curation into NWB format
  • ==0.2.9 requirements.txt

Size: 177 KB - Last synced: 12 months ago - Pushed: about 1 year ago

mouhaahmet/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.9 requirements.txt

Size: 3.68 MB - Last synced: 10 months ago - Pushed: almost 2 years ago

josephchengyx/spikeinterface Fork of grero/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.17 pyproject.toml

Size: 55.7 MB - Last synced: 10 months ago - Pushed: 10 months ago

gviejo/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.16 pyproject.toml

Size: 56.3 MB - Last synced: 8 months ago - Pushed: 8 months ago

chris-langfield/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.17 pyproject.toml

Size: 59.1 MB - Last synced: 2 months ago - Pushed: 2 months ago

essink/python-neo Fork of NeuralEnsemble/python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
  • * requirements_testing.txt

Size: 105 MB - Last synced: 9 months ago - Pushed: over 1 year ago

jup36/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.9 requirements.txt

Size: 3.59 MB - Last synced: 9 months ago - Pushed: about 2 years ago

Chetank99/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.17 pyproject.toml

Size: 55.4 MB - Last synced: 8 months ago - Pushed: 8 months ago

mzabolocki/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.14 pyproject.toml

Size: 42.1 MB - Last synced: about 1 month ago - Pushed: 2 months ago

munahaf/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.17 pyproject.toml

Size: 55.6 MB - Last synced: 8 months ago - Pushed: 8 months ago

alejoe91/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.17 pyproject.toml

Size: 60.5 MB - Last synced: 1 day ago - Pushed: 1 day ago

zm711/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.17 pyproject.toml

Size: 60.4 MB - Last synced: about 5 hours ago - Pushed: about 10 hours ago

h-mayorquin/spikeinterface Fork of SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.16 pyproject.toml

Size: 60.5 MB - Last synced: about 24 hours ago - Pushed: 1 day ago

SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
  • >=0.2.17 pyproject.toml

Size: 60.2 MB - Last synced: 7 days ago - Pushed: 7 days ago

neuroinformatics-unit/extracellular-ephys-analysis-course-2023
Covering how to build electrophysiology pipelines with SpikeInterface
  • ==0.2.18 requirements.txt

Size: 103 MB - Last synced: 7 months ago - Pushed: 7 months ago

AllenInstitute/npc_sessions
Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.
  • ==0.2.17 requirements.txt

Size: 28.8 MB - Last synced: about 2 hours ago - Pushed: 1 day ago

YaleMRRC/calPrep
  • ==0.2.9 installationFiles/environment.yml

Size: 207 KB - Last synced: 4 months ago - Pushed: over 1 year ago

AntonioST/NeuroCarto
A web-based, neural probe channel map editor for the Neuropixels probe.
  • * requirements-opt.txt

Size: 2.77 MB - Last synced: about 15 hours ago - Pushed: about 15 hours ago

BeNeuroLab/beneuro_experimental_data_organization
Code for checking, moving, and processing the data recorded in the lab
  • 0.2.20 poetry.lock

Size: 345 KB - Last synced: about 1 month ago - Pushed: about 1 month ago

mcrewcow/fetal_retina_PODs_Soucy_Kriukov
  • =0.2.20=pypi_0 requirements.txt

Size: 16.3 MB - Last synced: 1 day ago - Pushed: 1 day ago

NxNiki/NWBExamples
  • 0.2.21 poetry.lock

Size: 1.82 MB - Last synced: 2 months ago - Pushed: 2 months ago

JohnStout/caiman_fastplotlib_notebooks
Jupyter-lab toolbox to aid in calcium_imaging analysis/visualization using CaImAn and fastplotlib
  • ==0.2.20 environment.yml

Size: 210 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

JoeZiminski/ephysworking
General scripts for ephys
  • * pyproject.toml

Size: 23.4 KB - Last synced: 19 days ago - Pushed: 20 days ago

AllenNeuralDynamics/aind-ephys-transformation
Code to compress ephys data
  • ==0.2.21 pyproject.toml

Size: 592 KB - Last synced: 6 days ago - Pushed: 14 days ago

USArhythms/ingestion_scripts
  • ==0.2.9 requirements.txt

Size: 235 KB - Last synced: about 5 hours ago - Pushed: about 6 hours ago