stain/research-software-ecosystem.github.io Fork of research-software-ecosystem/research-software-ecosystem.github.io

Research Software Ecosystem

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stain/workflow-run-crate Fork of ResearchObject/workflow-run-crate

Workflow Run RO-Crate profile

Language: Python - Size: 56.5 MB - Last synced: 16 days ago - Pushed: 17 days ago - Stars: 0 - Forks: 0

stain/signposting

Python library for parsing FAIR Signposting links

Language: Python - Size: 538 KB - Last synced: 22 days ago - Pushed: 3 months ago - Stars: 4 - Forks: 5

stain/phd

PhD thesis (in preparation)

Language: TeX - Size: 26.3 MB - Last synced: 30 days ago - Pushed: 30 days ago - Stars: 1 - Forks: 0

stain/s11.no

s11.no website (hugo)

Language: HTML - Size: 84 MB - Last synced: 29 days ago - Pushed: 30 days ago - Stars: 0 - Forks: 1

stain/2016-provweek-tavernaprov

Abstract submitted to http://provenanceweek.org/2016/p3yl/

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stain/ro-crate-sparql

Example of RO-Crate in sparql

Language: Jupyter Notebook - Size: 15.6 KB - Last synced: about 2 months ago - Pushed: 11 months ago - Stars: 0 - Forks: 0

stain/WPSS-for-ESS-webpanel Fork of CDSP-SCPO/WPSS-for-ESS-webpanel

A management tool for harmonised longitudinal studies (to get along with a Qualtrics license)

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stain/zenodo Fork of zenodo/zenodo

Research. Shared.

Language: Python - Size: 9.14 MB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

stain/WPS Fork of 52North/WPS

The 52°North Web Processing Service enables the deployment of geo-processes on the web in a standardized way.

Language: Java - Size: 19.3 MB - Last synced: about 2 months ago - Pushed: almost 8 years ago - Stars: 0 - Forks: 0

stain/wpsld

WorkPlace Shell based on Linked Data and JavaFX (planning stage)

Language: Java - Size: 98.6 KB - Last synced: about 2 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

stain/WfExS-backend Fork of inab/WfExS-backend

Workflow Execution Service Backend

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stain/xws-taverna Fork of egonw/xws-taverna

XWS Plugin for Taverna

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stain/WP2_workshop_tool_packaging Fork of eosc-life/WP2_workshop_tool_packaging

Size: 426 KB - Last synced: about 2 months ago - Pushed: almost 4 years ago - Stars: 0 - Forks: 0

stain/workflowscommunity.github.io Fork of workflowscommunity/workflowscommunity.github.io

The goal of the Workflows Community Initiative (WCI) is to bring the workflows community together (users, developers, researchers, and facilities) to provide community resources and capabilities to enable scientists and workflow systems developers to discover software products, related efforts, events, technical reports, etc. and engage in community-wide efforts to tackle workflows grand challenges.

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stain/workflow-is-cwl Fork of EBI-Metagenomics/workflow-is-cwl

This repository contains CWL descriptions of the various tools which will allow you to build workflows for the annotation of transcripts

Language: Common Workflow Language - Size: 18.8 MB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

stain/worldcupbingo

FIFA World Cup 2018 bingo

Language: HTML - Size: 131 KB - Last synced: about 2 months ago - Pushed: almost 3 years ago - Stars: 5 - Forks: 4

stain/Wf4Ever-PROV Fork of provbench/Wf4Ever-PROV

The repository for the Wf4Ever team.

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stain/wikitest

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stain/virtuoso-docker Fork of nicholsn/ansible-role-virtuoso

Virtuoso docker image

Language: Shell - Size: 67.4 KB - Last synced: about 2 months ago - Pushed: almost 7 years ago - Stars: 11 - Forks: 3

stain/web-annotation Fork of w3c/web-annotation

Web Annotation Working Group repository

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stain/wasmflow.com Fork of wasmflow/wasmflow.com

Size: 3.35 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

stain/taverna-jekyll-site

Draft website for Apache Taverna (Jekyll-based)

Language: CSS - Size: 426 KB - Last synced: about 2 months ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0

stain/Tool-Information-Standards Fork of bio-tools/Tool-Information-Standards

GitHub pages website summarising information standards for the description of bioinformatics software tools.

Size: 4.07 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

stain/Taverna.server.android.client Fork of xyz1hang/Taverna.server.android.client

Language: Java - Size: 62.5 KB - Last synced: about 2 months ago - Pushed: over 11 years ago - Stars: 0 - Forks: 0

stain/taverna-server Fork of taverna/taverna-server

Taverna Server is an implementation of the Taverna Platform execution model as a REST and SOAP web service.

Language: Java - Size: 288 MB - Last synced: about 2 months ago - Pushed: about 10 years ago - Stars: 0 - Forks: 0

stain/v_triton

Language: C - Size: 5.19 MB - Last synced: about 2 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

stain/Taverna_Provenance Fork of cyfer/Taverna_Provenance

A repository that hosts files related to my MSc dissertation on Taverna's provenance

Language: Java - Size: 4.8 MB - Last synced: about 2 months ago - Pushed: almost 13 years ago - Stars: 1 - Forks: 0

stain/taverna-workbench-product Fork of taverna/taverna-workbench-product

Taverna Workbench product build and installers

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stain/TEST-template-uva-thesis Fork of lhoangan/template-uva-thesis

PhD thesis template with title page according to the University of Amsterdam.

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stain/video-library Fork of gallantries/video-library

Language: Python - Size: 41.9 MB - Last synced: about 2 months ago - Pushed: 6 months ago - Stars: 0 - Forks: 0

stain/TESK Fork of elixir-cloud-aai/TESK

GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes

Size: 90.1 MB - Last synced: about 2 months ago - Pushed: about 3 years ago - Stars: 0 - Forks: 0

stain/test1

Example of Junit tests with Maven

Language: Java - Size: 93.8 KB - Last synced: about 2 months ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0

stain/taverna-grid Fork of NCIP/taverna-grid

The taverna-grid repository is a Taverna Workbench plug-in to support invocation of caGrid 1.x services.

Language: Logos - Size: 51.2 MB - Last synced: about 2 months ago - Pushed: almost 11 years ago - Stars: 0 - Forks: 0

stain/topmed-workflows Fork of DataBiosphere/topmed-workflows

a place for topmed workflows

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stain/Void-Editor Fork of openphacts/Void-Editor

Language: JavaScript - Size: 1.5 MB - Last synced: about 2 months ago - Pushed: over 11 years ago - Stars: 0 - Forks: 0

stain/taverna-sandbox Fork of enridaga/taverna-sandbox

Language: Java - Size: 58.6 KB - Last synced: about 2 months ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

stain/test-crate-001

Size: 4.88 KB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

stain/test-orcid-gitauthor

Can we use ORCIDs as git's user.name or user.email ?

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stain/vert-papers Fork of microsoft/vert-papers

This repository contains code and datasets related to entity/knowledge papers from the VERT (Versatile Entity Recognition & disambiguation Toolkit) project, by the Knowledge Computing group at Microsoft Research Asia (MSRA).

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stain/VMG3925-B10B Fork of trejan/VMG3925-B10B

Firmware for the Zyxel VMG3925-B10B

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stain/v_doc

Snapshot of Netlab Voyager Documentation.

Language: HTML - Size: 2.45 MB - Last synced: about 2 months ago - Pushed: almost 3 years ago - Stars: 0 - Forks: 0

stain/v_desktop

Snapshot of Netlabs Voyager Desktop

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stain/Taverna-mobile-0.1 Fork of xyz1hang/Taverna-mobile-0.1

Taverna Server Android Client v0.1

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stain/taverna

Automatically exported from code.google.com/p/taverna

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stain/sustaining-research-projects Fork of danielskatz/sustaining-research-projects

sustainability models for research software projects

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stain/swift-phylo Fork of mmondelli/swift-phylo

Workflow for Phylogenetic Analysis using the Swift parallel scripting system.

Language: C - Size: 21.4 MB - Last synced: about 2 months ago - Pushed: almost 6 years ago - Stars: 0 - Forks: 0

stain/t2-server-jar-android-0.1 Fork of xyz1hang/t2-server-jar-android-0.1

Taverna Server Android API v0.1

Language: Java - Size: 656 KB - Last synced: about 2 months ago - Pushed: almost 11 years ago - Stars: 0 - Forks: 0

stain/SPP_Command_Line_Tool Fork of cyfer/SPP_Command_Line_Tool

A repository that hosts the Semantic Provenance Processor command-line line tool

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stain/sysconf Fork of eitanf/sysconf

Statistical observations on systems publications

Size: 66 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

stain/specifications Fork of ResearchObject/specifications

Research Object Specifications

Language: HTML - Size: 9.63 MB - Last synced: about 2 months ago - Pushed: almost 9 years ago - Stars: 0 - Forks: 0

stain/strigidoc Fork of irl/strigidoc

A documentation generator for OWL ontologies

Language: JavaScript - Size: 4.67 MB - Last synced: about 2 months ago - Pushed: about 11 years ago - Stars: 0 - Forks: 0

stain/staged-recipes Fork of conda-forge/staged-recipes

A place to submit conda recipes before they become fully fledged conda-forge feedstocks

Language: Python - Size: 15.2 MB - Last synced: about 2 months ago - Pushed: over 6 years ago - Stars: 0 - Forks: 0

stain/sunzip Fork of madler/sunzip

Streaming unzip utility.

Language: C - Size: 43.9 KB - Last synced: about 2 months ago - Pushed: almost 5 years ago - Stars: 1 - Forks: 0

stain/synthetic-health-data-generator Fork of LBolzani/synthetic-health-data-generator

Size: 43.7 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

stain/specref Fork of tobie/specref

A list of spec references and related API.

Language: JavaScript - Size: 6.75 MB - Last synced: about 2 months ago - Pushed: over 9 years ago - Stars: 0 - Forks: 0

stain/shootout-docker-maven Fork of fabric8io/shootout-docker-maven

A comparison between the four major docker-maven-plugins

Language: Java - Size: 149 KB - Last synced: about 2 months ago - Pushed: about 9 years ago - Stars: 0 - Forks: 0

stain/scufl2-paper

Paper: scufl2 and wfdesc

Language: TeX - Size: 301 KB - Last synced: about 2 months ago - Pushed: about 9 years ago - Stars: 0 - Forks: 0

stain/silver-halibut

Language: HTML - Size: 3.91 KB - Last synced: about 2 months ago - Pushed: about 1 year ago - Stars: 0 - Forks: 0

stain/scufl2-iwir

Convert Taverna Scufl2 workflow bundle to SHIWA IWIR description

Language: Java - Size: 906 KB - Last synced: about 2 months ago - Pushed: over 8 years ago - Stars: 1 - Forks: 0

stain/scufl2-wfdesc

Convert from Scufl2 to wfdesc from Wf4Ever RO ontology

Language: Java - Size: 119 KB - Last synced: about 2 months ago - Pushed: over 12 years ago - Stars: 2 - Forks: 2

stain/scufl2-clojure

Using Scufl2 from Clojure

Language: Clojure - Size: 184 KB - Last synced: about 2 months ago - Pushed: over 10 years ago - Stars: 2 - Forks: 0

stain/scape-component-profiles Fork of openpreserve/scape-component-profiles

Holds the SCAPE component profile ontology and profile XML files.

Language: Ruby - Size: 324 KB - Last synced: about 2 months ago - Pushed: about 11 years ago - Stars: 0 - Forks: 0

stain/seek Fork of seek4science/seek

Language: Ruby - Size: 232 MB - Last synced: about 2 months ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

stain/scufl2-info

SCUFL2 information web service

Language: Clojure - Size: 344 KB - Last synced: about 2 months ago - Pushed: over 9 years ago - Stars: 0 - Forks: 0

stain/rp2paths Fork of brsynth/rp2paths

RetroPath2.0 to pathways

Language: Python - Size: 5.12 MB - Last synced: about 2 months ago - Pushed: over 5 years ago - Stars: 0 - Forks: 0

stain/Shakespeare-s-Sonnets_1041 Fork of GITenberg/Shakespeare-s-Sonnets_1041

Shakespeare's Sonnets by Shakespeare, William, 1564-1616 is a Project Gutenberg book, now on Github.

Size: 160 KB - Last synced: about 2 months ago - Pushed: almost 10 years ago - Stars: 0 - Forks: 0

stain/schemaorg Fork of schemaorg/schemaorg

Schema.org - schemas and (appengine) software

Size: 81.9 MB - Last synced: about 2 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

stain/scufl2-awf

Reader for AWE workflows - see https://github.com/MG-RAST/AWE

Language: Java - Size: 133 KB - Last synced: about 2 months ago - Pushed: over 10 years ago - Stars: 0 - Forks: 0

stain/script-maven-plugin Fork of alexec/script-maven-plugin

script-maven-plugin

Language: Java - Size: 27.3 KB - Last synced: about 2 months ago - Pushed: about 8 years ago - Stars: 0 - Forks: 0

stain/scRNAseq_Benchmark Fork of tabdelaal/scRNAseq_Benchmark

Bench-marking classification tools for scRNA-seq data

Size: 239 KB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

stain/scalability-reproducibility-chapter Fork of FarahZKhan/scalability-reproducibility-chapter

Data and workflow examples

Language: Perl - Size: 906 KB - Last synced: about 2 months ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

stain/RocksDBPI Fork of egibert/RocksDBPI

Size: 38.4 MB - Last synced: about 2 months ago - Pushed: almost 7 years ago - Stars: 0 - Forks: 0

stain/rubyzip Fork of rubyzip/rubyzip

Offical Rubyzip repository

Language: Ruby - Size: 1.03 MB - Last synced: about 2 months ago - Pushed: almost 10 years ago - Stars: 0 - Forks: 0

stain/scrapbook

Various small utillities

Language: Python - Size: 25.9 MB - Last synced: about 2 months ago - Pushed: about 5 years ago - Stars: 3 - Forks: 2

stain/ro-crate-js Fork of UTS-eResearch/ro-crate-js

Research Object Crate (RO-Crate) utilities

Size: 3.7 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

stain/RO-Crate-Registry Fork of XiaotianWang0918/RO-Crate-Registry

Size: 1.62 MB - Last synced: about 2 months ago - Pushed: almost 2 years ago - Stars: 0 - Forks: 0

stain/ro-crate-html-js Fork of UTS-eResearch/ro-crate-html-js

Size: 2.79 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

stain/ro-crate Fork of ResearchObject/ro-crate

Research Object Crate

Language: Python - Size: 11.7 MB - Last synced: about 2 months ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0

stain/ro-combine-archive

Convert Combine Archive (OMEX) to RO Bundle

Language: Java - Size: 1.53 MB - Last synced: about 2 months ago - Pushed: about 9 years ago - Stars: 3 - Forks: 0

stain/reveal-md Fork of webpro/reveal-md

reveal.js on steroids! Get beautiful reveal.js presentations from any Markdown file

Size: 502 KB - Last synced: about 2 months ago - Pushed: about 4 years ago - Stars: 0 - Forks: 0

stain/rnaseq Fork of nf-core/rnaseq

RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control

Size: 49.9 MB - Last synced: about 2 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

stain/reprozip Fork of VIDA-NYU/reprozip

ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.

Language: Python - Size: 10.6 MB - Last synced: about 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

stain/rdf4j Fork of eclipse-rdf4j/rdf4j

RDF4J Project

Language: Java - Size: 9.47 MB - Last synced: about 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

stain/rash-framework.github.io Fork of rash-framework/rash-framework.github.io

Website for the RASH Framework

Language: HTML - Size: 1.07 MB - Last synced: about 2 months ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

stain/rabix Fork of rabix/rabix

Reproducible Analyses for Bioinformatics

Language: Python - Size: 88.3 MB - Last synced: about 2 months ago - Pushed: over 7 years ago - Stars: 0 - Forks: 0

stain/ProvToolbox Fork of lucmoreau/ProvToolbox

Java toolbox to create and convert Provenance Interchange data Model representations

Language: Java - Size: 19.9 MB - Last synced: about 2 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

stain/Python-LRU-cache Fork of stucchio/Python-LRU-cache

An in-memory LRU cache for python

Language: Python - Size: 137 KB - Last synced: about 2 months ago - Pushed: over 9 years ago - Stars: 0 - Forks: 0

stain/prov-lodspeakr Fork of timrdf/prov-lodspeakr

Models and Views for W3C Provenance Working Group's OWL Ontology

Language: PHP - Size: 118 MB - Last synced: about 2 months ago - Pushed: over 11 years ago - Stars: 1 - Forks: 0

stain/prov-viewer Fork of gems-uff/prov-viewer

Provenance Visualization Tool

Language: Prolog - Size: 109 MB - Last synced: about 2 months ago - Pushed: about 6 years ago - Stars: 0 - Forks: 0

stain/provenance-corpus

Provenance corpus

Size: 102 KB - Last synced: about 2 months ago - Pushed: almost 12 years ago - Stars: 0 - Forks: 0

stain/provn-language-vscode

provn Language Support for VSCode

Size: 10.7 KB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

stain/postmeritocracy Fork of CoralineAda/postmeritocracy

Size: 312 KB - Last synced: about 2 months ago - Pushed: over 3 years ago - Stars: 0 - Forks: 0

stain/pizza-ontology Fork of owlcs/pizza-ontology

The pizza ontology

Language: Web Ontology Language - Size: 47.9 KB - Last synced: about 2 months ago - Pushed: about 7 years ago - Stars: 0 - Forks: 0

stain/perl-oai-lib Fork of LibreCat/perl-oai-lib

HTTP::OAI

Language: Perl - Size: 142 KB - Last synced: about 2 months ago - Pushed: over 4 years ago - Stars: 0 - Forks: 0

stain/planemo Fork of galaxyproject/planemo

Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training materials.

Size: 9.12 MB - Last synced: about 2 months ago - Pushed: over 2 years ago - Stars: 0 - Forks: 0

stain/pebble-notifier Fork of dattas/pebble-notifier

Pebble notifier for Android

Language: Java - Size: 62.5 KB - Last synced: about 2 months ago - Pushed: over 11 years ago - Stars: 0 - Forks: 0

stain/perfs

PerFS Peer-to-peer distributed file system

Language: Java - Size: 13.5 MB - Last synced: about 2 months ago - Pushed: about 14 years ago - Stars: 2 - Forks: 0

stain/paq

Example of using PROV-AQ

Language: Java - Size: 172 KB - Last synced: about 2 months ago - Pushed: about 11 years ago - Stars: 1 - Forks: 0

stain/owlapi-jsonld

JSON-LD parser and writer for OWL API

Language: Java - Size: 54.7 KB - Last synced: about 2 months ago - Pushed: over 8 years ago - Stars: 16 - Forks: 1