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GitHub / Aarhus-Psychiatry-Research / timeseriesflattener

Converting irregularly spaced time series, such as eletronic health records, into statically shaped dataframes.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Aarhus-Psychiatry-Research%2Ftimeseriesflattener

Stars: 19
Forks: 2
Open Issues: 5

License: mit
Language: Python
Repo Size: 112 MB
Dependencies: 61

Created: over 1 year ago
Updated: 4 days ago
Last pushed: 4 days ago
Last synced: 4 days ago

Topics: electronic-healthcare-data, irregular-time-series, machine-learning, python, python3, time-series-analysis

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Readme

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Dependencies

.github/workflows/generate_paper_pdf.yml actions

actions/checkout v2 composite
actions/upload-artifact v1 composite
openjournals/openjournals-draft-action master composite

.github/actions/test/action.yml actions

MartinBernstorff/cache-poetry-and-venv latest composite
actions/setup-python v4 composite
snok/install-poetry v1 composite

.github/actions/test_tutorials/action.yml actions

MartinBernstorff/cache-poetry-and-venv latest composite
actions/setup-python v4 composite
snok/install-poetry v1 composite

.github/workflows/dependabot_automerge.yml actions

hmarr/auto-approve-action v2 composite

.github/workflows/documentation.yml actions

JamesIves/github-pages-deploy-action 4.1.4 composite
MartinBernstorff/cache-poetry-and-venv latest composite
actions/checkout v3 composite
actions/setup-python v4 composite
snok/install-poetry v1 composite

.github/workflows/main_test_and_release.yml actions

./.github/actions/test * composite
./.github/actions/test_tutorials * composite
actions/checkout v3 composite
actions/checkout v2 composite
relekang/python-semantic-release v7.32.0 composite

.github/workflows/pre-commit.yml actions

actions/checkout v3 composite
actions/setup-python v4 composite
pre-commit/action v3.0.0 composite

pyproject.toml pypi

black >=22.8.0,<22.10.1 develop
docformatter >=1.5.0, <1.5.2 develop
flake8 >=5.0.0, <5.0.6 develop
furo 2022.9.29 develop
mypy >=0.971,<0.992 develop
myst-parser >=0.18.1,<0.18.2 develop
pre-commit >=2.20.0, <2.20.2 develop
pylint >=2.15.5,<2.16.0 develop
pytest >=7.1.3, <7.1.5 develop
pytest-cov >=3.0.0,<4.0.1 develop
pytest-xdist >=2.4.0, <2.5.2 develop
sphinx >=5.3.0,<5.4.0 develop
sphinx-copybutton >=0.5.1,<0.5.2 develop
sphinx_design >=0.3.0,<0.3.1 develop
sphinxext-opengraph >=0.7.3,<0.7.4 develop
SQLAlchemy >=1.4.41, <1.5.42
catalogue >=2.0.0, <2.1.0
coloredlogs >14.0.0,<15.1.0
dask >=2022.9.0,<2022.12.0
deepchecks >=0.8.0,<0.10.0
dill >=0.3.0, <0.3.6
frozendict >=2.3.4,<2.4.0
jupyter >=1.0.0,<1.1.0
numpy >=1.23.3,<1.23.6
pandas >=1.4.0,<1.6.0
protobuf <=3.20.3
psutil >=5.9.1, <6.0.0
psycopmlutils >=0.2.4, <0.3.0
pyarrow >=9.0.0,<9.1.0
pydantic >=1.9.0, <1.10.0
pyodbc >=4.0.34, <4.0.36
python >=3.9, <3.11
scikit-learn >=1.1.2, <1.1.3
scipy >=1.8.0,<1.9.4
skimpy >=0.0.7,<0.1.0
srsly >=2.4.4,<2.4.6
wandb >=0.12.0,<0.13.5
wasabi >=0.9.1,<0.10.2