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GitHub / BaderLab / saber
Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work in progress. Many things are broken, and the codebase is not stable.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BaderLab%2Fsaber
Stars: 102
Forks: 17
Open Issues: 38
License: mit
Language: Python
Repo Size: 3.85 MB
Dependencies:
14
Created: over 6 years ago
Updated: about 2 months ago
Last pushed: almost 4 years ago
Last synced: 13 days ago
Topics: bioinformatics, biomedical-named-entity-recognition, biomedical-text-mining, deep-learning, information-extraction, machine-learning, spacy
Files
Dependencies
- Flask >=1.0.2
- PTable >=0.9.2
- en-coref-md *
- gensim >=3.4.0
- google-compute-engine *
- googledrivedownloader >=0.3
- keras ==2.2.4
- keras-contrib *
- msgpack ==0.5.6
- nltk >=3.3
- scikit-learn >=0.20.1
- spacy >=2.0.11,
- tensorflow >=1.12.0
- waitress >=1.1.0