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GitHub / BiomedicalMachineLearning / stLearn
A novel machine learning pipeline to analyse spatial transcriptomics data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BiomedicalMachineLearning%2FstLearn
Stars: 164
Forks: 20
Open Issues: 6
License: other
Language: Python
Repo Size: 4.93 MB
Dependencies:
34
Created: over 4 years ago
Updated: 9 days ago
Last pushed: about 2 months ago
Last synced: 4 days ago
Commit Stats
Commits: 339
Authors: 8
Mean commits per author: 42.38
Development Distribution Score: 0.46
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/BiomedicalMachineLearning/stLearn
Files
Dependencies
- ipyvolume ==0.6.0a1
- ipywebrtc *
- ipywidgets *
- jupyter_sphinx ==0.1.4
- nbclean >=0.3.2
- nbformat *
- nbsphinx >=0.7.0
- pygments >=2.4.1
- recommonmark *
- sphinx ==3.0.0
- sphinx-autodoc-typehints *
- sphinx_gallery *
- sphinx_rtd_theme >=0.3.1
- typing_extensions *
- Pillow >=9.0.1
- bokeh >=2.4.2
- click >=8.0.4
- leidenalg *
- louvain *
- numpy >=1.18,<1.22
- scanpy >=1.8.2
- scikit-image >=0.19.2
- tensorflow *
- Flask ==2.0.3
- WTForms ==3.0.1
- flask_wtf ==1.0.0
- markupsafe ==2.1.0
- actions/checkout v2 composite
- actions/setup-python v2 composite
- pre-commit/action v2.0.0 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite