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GitHub / Computational-Genomics-BSC / GenomeMosaicMaker

Tool for copying read-alignments regions centered around variants (in VCF/VCF.GZ/BCF format) from existing genomes (in SAM/BAM/CRAM format) to insert them into canvas genomes (in SAM/BAM/CRAM format).

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Computational-Genomics-BSC%2FGenomeMosaicMaker

Stars: 0
Forks: 0
Open Issues: 0

License: other
Language: Python
Repo Size: 239 KB
Dependencies: 6

Created: 6 months ago
Updated: 6 months ago
Last pushed: 2 months ago
Last synced: 2 months ago

Topics: bam, cram, genomics, mosaic, sam, vcf

Files

Readme

Dependencies

.github/workflows/semantic_release.yml actions

actions/checkout v3 composite
actions/checkout v2 composite
actions/setup-go v1 composite
python-semantic-release/python-semantic-release master composite
python-semantic-release/upload-to-gh-release main composite

Dockerfile docker

ubuntu 20.04 build

pyproject.toml pypi

setup.py pypi