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GitHub / ESR-NZ / human_genomics_pipeline
A Snakemake workflow to process single samples or cohorts of Illumina paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4/parabricks.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ESR-NZ%2Fhuman_genomics_pipeline
Stars: 23
Forks: 19
Open Issues: 1
License: None
Language: Python
Repo Size: 13.2 MB
Dependencies:
0
Created: over 4 years ago
Updated: 8 months ago
Last pushed: over 1 year ago
Last synced: 7 months ago
Topics: cohort-analysis, exome-pipeline, gatk-bestpractices, gatk4, genomics, illumina, nvidia-clara-parabricks, nvidia-gpu, pipeline, snakemake-pipeline
Files
No dependencies found