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GitHub / EricKenjiLee / WaveMAP_Paper
This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linear Dimensionality Reduction on Extracellular Waveforms Reveals Physiological, Functional, and Laminar Diversity in Premotor Cortex.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/EricKenjiLee%2FWaveMAP_Paper
Stars: 7
Forks: 2
Open Issues: 0
License: mit
Language: Jupyter Notebook
Repo Size: 12.4 MB
Dependencies:
259
Created: over 3 years ago
Updated: 10 months ago
Last pushed: 10 months ago
Last synced: 10 months ago
Topics: dimensionality-reduction, louvain-community-detection, shap, umap
Files
Dependencies
- bokeh ^3.0.3
- cylouvain ^0.2.2
- ipykernel ^6.19.2
- jupyterlab ^3.5.1
- matplotlib ^3.6.2
- networkx ^2.8.8
- python ^3.8
- scikit-learn ^1.2.0
- shap ^0.41.0
- umap-learn ^0.5.3
- xgboost ^1.7.2
- anyio ==3.6.2
- appnope ==0.1.3
- argon2-cffi ==21.3.0
- argon2-cffi-bindings ==21.2.0
- arrow ==1.2.3
- asttokens ==2.2.1
- attrs ==22.1.0
- babel ==2.11.0
- backcall ==0.2.0
- beautifulsoup4 ==4.11.1
- bleach ==5.0.1
- bokeh ==3.0.3
- certifi ==2022.12.7
- cffi ==1.15.1
- charset-normalizer ==2.1.1
- cloudpickle ==2.2.0
- colorama ==0.4.6
- comm ==0.1.2
- contourpy ==1.0.6
- cycler ==0.11.0
- cylouvain ==0.2.2
- debugpy ==1.6.4
- decorator ==5.1.1
- defusedxml ==0.7.1
- entrypoints ==0.4
- executing ==1.2.0
- fastjsonschema ==2.16.2
- fonttools ==4.38.0
- fqdn ==1.5.1
- idna ==3.4
- importlib-metadata ==5.1.0
- importlib-resources ==5.10.1
- ipykernel ==6.19.2
- ipython ==8.7.0
- ipython-genutils ==0.2.0
- isoduration ==20.11.0
- jedi ==0.18.2
- jinja2 ==3.1.2
- joblib ==1.2.0
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- jsonpointer ==2.3
- jsonschema ==4.17.3
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- nbformat ==5.7.0
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- notebook ==6.5.2
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- numba ==0.56.4
- numpy ==1.23.5
- packaging ==22.0
- pandas ==1.5.2
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- parso ==0.8.3
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- pillow ==9.3.0
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- py ==1.11.0
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- pyparsing ==3.0.9
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- python-dateutil ==2.8.2
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- pytz ==2022.6
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- pywinpty ==2.0.9
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- requests ==2.28.1
- rfc3339-validator ==0.1.4
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- scikit-learn ==1.2.0
- scipy ==1.9.3
- send2trash ==1.8.0
- setuptools-scm ==7.0.5
- shap ==0.41.0
- six ==1.16.0
- slicer ==0.0.7
- sniffio ==1.3.0
- soupsieve ==2.3.2.post1
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- tomli ==2.0.1
- tornado ==6.2
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- traitlets ==5.7.0
- typing-extensions ==4.4.0
- umap-learn ==0.5.3
- uri-template ==1.2.0
- urllib3 ==1.26.13
- wcwidth ==0.2.5
- webcolors ==1.12
- webencodings ==0.5.1
- websocket-client ==1.4.2
- xgboost ==1.7.2
- xyzservices ==2022.9.0
- zipp ==3.11.0