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GitHub / FrederickHuangLin / ANCOMBC
Differential abundance (DA) and correlation analyses for microbial absolute abundance data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FrederickHuangLin%2FANCOMBC
Stars: 91
Forks: 23
Open Issues: 36
License: None
Language: R
Repo Size: 435 KB
Dependencies:
28
Created: almost 4 years ago
Updated: 25 days ago
Last pushed: 5 months ago
Last synced: 19 days ago
Topics: ancom, ancombc, ancombc2, correlation, differential-abundance-analysis, microbiome, normalization, secom, sequencing
Files
Dependencies
- DescTools * imports
- Hmisc * imports
- MASS * imports
- Rdpack * imports
- doParallel * imports
- doRNG * imports
- dplyr * imports
- energy * imports
- foreach * imports
- magrittr * imports
- microbiome * imports
- nlme * imports
- nloptr * imports
- parallel * imports
- phyloseq * imports
- rlang * imports
- stats * imports
- tibble * imports
- tidyr * imports
- DT * suggests
- corrplot * suggests
- ggforce * suggests
- knitr * suggests
- limma * suggests
- qwraps2 >= 0.5.0 suggests
- rmarkdown * suggests
- testthat * suggests
- tidyverse * suggests