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GitHub topics: ancom

FrederickHuangLin/ANCOMBC

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

Language: R - Size: 658 KB - Last synced at: 19 days ago - Pushed at: about 2 months ago - Stars: 121 - Forks: 29

FrederickHuangLin/ANCOM-Code-Archive

Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM function.

Language: R - Size: 902 KB - Last synced at: over 1 year ago - Pushed at: almost 3 years ago - Stars: 58 - Forks: 39

FrederickHuangLin/ANCOM-BC-Code-Archive

Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check our ANCOMBC R package for the most up-to-date ANCOM-BC function.

Language: HTML - Size: 43.7 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 27 - Forks: 9

FrederickHuangLin/SECOM-Code-Archive

Archive: Data, scripts, and outputs for the paper "Sparse Estimation of Correlations among Microbiomes (SECOM)". Please check our ANCOMBC R package for the most up-to-date SECOM functions.

Language: HTML - Size: 197 MB - Last synced at: about 2 years ago - Pushed at: almost 3 years ago - Stars: 1 - Forks: 0