Ecosyste.ms: Repos

An open API service providing repository metadata for many open source software ecosystems.

GitHub topics: compositional-data

Repositories

ajmolstad/SpPDCC

R package for estimating sparse and positive definite basis covariance matrices from compositional data

Language: R - Size: 164 KB - Last synced: 16 days ago - Pushed: 17 days ago - Stars: 1 - Forks: 1

dadosdelaplace/dadosdelaplace

About me: mathematician, PhD Stats, Assistant Professor and scicomm

Size: 51.8 KB - Last synced: 21 days ago - Pushed: 21 days ago - Stars: 0 - Forks: 0

tesselle/nexus

:globe_with_meridians: Sourcing Archaeological Materials by Chemical Composition

Language: R - Size: 1.09 MB - Last synced: about 8 hours ago - Pushed: about 1 month ago - Stars: 4 - Forks: 0

stefpeschel/NetCoMi

Network construction, analysis, and comparison for microbial compositional data

Language: R - Size: 16.7 MB - Last synced: about 1 month ago - Pushed: about 1 month ago - Stars: 133 - Forks: 24

meringlab/FlashWeave.jl

Inference of microbial interaction networks from large-scale heterogeneous abundance data

Language: Julia - Size: 1.29 MB - Last synced: about 1 month ago - Pushed: 2 months ago - Stars: 66 - Forks: 8

mcomas/codapack

Language: Java - Size: 67.9 MB - Last synced: 3 months ago - Pushed: 6 months ago - Stars: 6 - Forks: 3

JuliaEarth/CoDa.jl

Compositional data analysis in Julia

Language: Julia - Size: 286 KB - Last synced: 29 days ago - Pushed: about 2 months ago - Stars: 59 - Forks: 10

mpascariu/CoDa

Forecast mortality using Compositional Data Lee-Carter model - R Package

Language: R - Size: 2.55 MB - Last synced: 7 months ago - Pushed: over 5 years ago - Stars: 4 - Forks: 2

lch14forever/beem-static

📦BEEM-Static: An R package for inferring microbial interactions based on Lotka-Volterra models

Language: R - Size: 5.15 MB - Last synced: 7 months ago - Pushed: almost 3 years ago - Stars: 7 - Forks: 8

ofgulban/compoda

Simplex space operations for compositional data implemented in Python.

Language: Python - Size: 442 KB - Last synced: 28 days ago - Pushed: over 2 years ago - Stars: 13 - Forks: 0

seungwoo-stat/20th-PE-forecast

Forecasting the four-party vote share of the 20th presidential election of Republic of Korea

Language: R - Size: 16.8 MB - Last synced: 6 months ago - Pushed: 6 months ago - Stars: 1 - Forks: 0

mspreafico/BO06-LOTox

Longitudinal Latent Overall Toxicity (LOTox) profiles in osteosarcoma: a new taxonomy based on latent Markov models.

Language: R - Size: 78.1 KB - Last synced: 9 months ago - Pushed: 9 months ago - Stars: 0 - Forks: 0

jhhughes256/comp_app

Web applications for use with compositional data. Post-graduate work for Dr. Dot Dimuid and Prof. Timothy Olds at University of South Australia.

Language: R - Size: 68.4 KB - Last synced: 10 months ago - Pushed: almost 5 years ago - Stars: 0 - Forks: 0

Vision-CAIR/3DCoMPaT

Official repository for the 3DCoMPaT dataset (ECCV2022 Oral)

Language: Jupyter Notebook - Size: 192 MB - Last synced: 10 days ago - Pushed: about 1 year ago - Stars: 16 - Forks: 1

boehm-s/fun-php

Functional programming utilities for PHP

Language: PHP - Size: 979 KB - Last synced: 6 months ago - Pushed: almost 3 years ago - Stars: 29 - Forks: 2

Japal/zCompositions

Imputation of zeros, nondetects and missing data in compositional data sets

Language: R - Size: 303 KB - Last synced: 3 months ago - Pushed: 3 months ago - Stars: 4 - Forks: 1

FrederickHuangLin/SECOM-Code-Archive

Archive: Data, scripts, and outputs for the paper "Sparse Estimation of Correlations among Microbiomes (SECOM)". Please check our ANCOMBC R package for the most up-to-date SECOM functions.

Language: HTML - Size: 197 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago - Stars: 1 - Forks: 0

simhag/Compositional-Pre-Training-for-Semantic-Parsing-with-BERT

Implementation of Semantic Parsing with BERT and compositional pre-training on GeoQuery

Language: Scala - Size: 84.6 MB - Last synced: 9 months ago - Pushed: about 5 years ago - Stars: 11 - Forks: 5

nphdang/DeepCoDA

Deep learning for personalized interpretability for compositional health data

Language: Python - Size: 10.8 MB - Last synced: 11 months ago - Pushed: about 2 years ago - Stars: 6 - Forks: 1

kkdey/dash 📦

Dirichlet adaptive shrinkage for compositional data

Language: R - Size: 5.6 MB - Last synced: about 1 year ago - Pushed: over 6 years ago - Stars: 1 - Forks: 1

lm687/CompSign

CompSign: An R package for differential abundance of compositional mutational signatures

Language: R - Size: 109 MB - Last synced: 4 months ago - Pushed: 4 months ago - Stars: 0 - Forks: 0

SamGalanakis/SimilarSummonersGraph

Using champion mastery data from Rot games API to visualize champion connections based on correlation metrics of compositional data in a network. Unsupervised learning was also used to categorize the champions. Lastly, weighted graph distance was used to make a recommender system for new champions based on played chamoions input.

Language: HTML - Size: 34.4 MB - Last synced: about 1 year ago - Pushed: over 1 year ago - Stars: 0 - Forks: 0