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GitHub / GenomicsDB / GenomicsDB

High performance data storage for importing, querying and transforming variants.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/GenomicsDB%2FGenomicsDB

Stars: 89
Forks: 18
Open Issues: 29

License: other
Language: C++
Repo Size: 65.9 MB
Dependencies: 44

Created: almost 6 years ago
Updated: 22 days ago
Last pushed: 22 days ago
Last synced: 22 days ago

Commit Stats

Commits: 1567
Authors: 39
Mean commits per author: 40.18
Development Distribution Score: 0.607
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/GenomicsDB/GenomicsDB

Topics: bioinformatics, cpp, gatk, genomics, genomicsdb, java, mpi, precision-medicine, scala, spark, variant, variant-calling

Files
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    Readme
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    Dependencies
    pom.xml maven
    tests/requirements.txt pypi
    .github/workflows/basic.yml actions
    .github/workflows/codeql.yml actions
    .github/workflows/docker.yml actions
    .github/workflows/release.yml actions
    .github/workflows/release_jar.yml actions
    .github/workflows/release_publish.yml actions
    .github/workflows/release_test.yml actions
    Dockerfile docker
    • $os latest build
    docs/requirements.txt pypi