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GitHub / GregorySchwartz / too-many-cells
Cluster single cells and analyze cell clade relationships with colorful visualizations.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/GregorySchwartz%2Ftoo-many-cells
Stars: 100
Forks: 18
Open Issues: 8
License: gpl-3.0
Language: Haskell
Repo Size: 22.3 MB
Dependencies:
69
Created: over 5 years ago
Updated: about 1 month ago
Last pushed: 6 months ago
Last synced: about 1 month ago
Commit Stats
Commits: 387
Authors: 6
Mean commits per author: 64.5
Development Distribution Score: 0.062
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/GregorySchwartz/too-many-cells
Topics: bioinformatics-algorithms, bioinformatics-pipeline, single-cell, single-cell-analysis, single-cell-rna-seq, visualization
Files
Dependencies
- IntervalMap *
- SVGFonts *
- aeson *
- async *
- async-pool *
- attoparsec *
- base >=4.7 && <5
- base *
- birch-beer *
- bytestring *
- cassava *
- colour *
- containers *
- deepseq *
- diagrams *
- diagrams-cairo *
- diagrams-graphviz *
- diagrams-lib *
- differential *
- directory *
- diversity *
- fgl *
- filepath *
- find-clumpiness *
- foldl *
- graphviz *
- hashable *
- hierarchical-clustering *
- hierarchical-spectral-clustering *
- hmatrix *
- hmatrix-svdlibc *
- inline-r *
- lens *
- managed *
- matrix-market-attoparsec *
- modularity *
- mtl *
- mwc-random *
- optparse-generic *
- palette *
- parallel *
- plots *
- process *
- resourcet *
- safe *
- scientific *
- sparse-linear-algebra *
- spectral-clustering >=0.3.0.2
- split *
- statistics *
- stm *
- streaming *
- streaming-bytestring *
- streaming-cassava *
- streaming-commons *
- streaming-utils *
- streaming-with *
- system-filepath *
- temporary *
- terminal-progress-bar *
- text *
- text-show *
- too-many-cells *
- transformers *
- turtle >=1.5.18
- unordered-containers *
- vector *
- vector-algorithms *
- zlib *