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GitHub / GuckLab / impose

Align microscopy images using custom-defined structural patterns and superimpose those on data from other imaging modalities.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/GuckLab%2Fimpose

Stars: 1
Forks: 0
Open Issues: 20

License: gpl-3.0
Language: Python
Repo Size: 2.46 MB
Dependencies: 29

Created: over 2 years ago
Updated: 4 days ago
Last pushed: 4 days ago
Last synced: 4 days ago

Commit Stats

Commits: 109
Authors: 4
Mean commits per author: 27.25
Development Distribution Score: 0.239
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/GuckLab/impose

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Readme

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Dependencies

build-recipes/macos_build_requirements.txt pypi

pyinstaller >=5.0
shapely <1.8.1

build-recipes/win_build_requirements.txt pypi

pyinstaller >=5.0

docs/requirements.txt pypi

h5py *
ipython *
matplotlib *
numpy *
sphinx ==4.3.0
sphinx_rtd_theme ==1.0
sphinxcontrib.bibtex >=2.0

setup.py pypi

bmlab >=0.2.3
czifile ==2019.7.2
h5py >=2.10.0
imageio *
numpy >=1.17.0
pyqt6 >=6.2.0
pyqtgraph ==0.12.4
scikit-image >=0.17.2
scipy >=0.12.0

tests/requirements.txt pypi

pytest * test
pytest-qt * test

.github/workflows/check.yml actions

actions/checkout v3 composite
actions/setup-python v3 composite
actions/upload-artifact v3 composite

.github/workflows/deploy_github.yml actions

actions/checkout v3 composite
actions/setup-python v3 composite
softprops/action-gh-release v1 composite

.github/workflows/deploy_pypi.yml actions

actions/checkout v2 composite
actions/setup-python v2 composite