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GitHub / Irrationone / cellassign
Automated, probabilistic assignment of cell types in scRNA-seq data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Irrationone%2Fcellassign
Stars: 187
Forks: 78
Open Issues: 47
License: other
Language: R
Repo Size: 14.9 MB
Dependencies:
21
Created: almost 6 years ago
Updated: 14 days ago
Last pushed: over 1 year ago
Last synced: 4 days ago
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Dependencies
DESCRIPTION
cran
- R >= 3.6 depends
- SummarizedExperiment * imports
- methods * imports
- scran * imports
- stats * imports
- tensorflow * imports
- BiocStyle * suggests
- SingleCellExperiment * suggests
- dplyr * suggests
- edgeR * suggests
- knitr * suggests
- limma * suggests
- magick * suggests
- magrittr * suggests
- matrixStats * suggests
- org.Hs.eg.db * suggests
- pheatmap * suggests
- plyr * suggests
- reticulate * suggests
- rmarkdown * suggests
- testthat * suggests