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GitHub / IudiHub / BAMAlignR
An innovative R package designed for genomic data analysis. It efficiently reads BAM files, extracts specific read entries, and visualizes precise read-to-genome alignments based on the CIGAR string. With BAMAlignR, researchers can gain deeper insights into genomic variations and structural variants, enhancing their analytical workflows.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/IudiHub%2FBAMAlignR
Stars: 0
Forks: 0
Open Issues: 0
License: apache-2.0
Language: R
Repo Size: 2.46 MB
Dependencies:
10
Created: 3 months ago
Updated: 3 months ago
Last pushed: 3 months ago
Last synced: 3 months ago
Files
Dependencies
- R >= 4.3.0 depends
- BSgenome.Hsapiens.NCBI.GRCh38 * imports
- GenomicRanges * imports
- IRanges * imports
- Rsamtools * imports
- stringr * imports
- BiocStyle * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat >= 3.0.0 suggests