Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
Package Usage: cran: BSgenome.Hsapiens.NCBI.GRCh38
View more package details: https://packages.ecosyste.ms/registries/cran.r-project.org/packages/BSgenome.Hsapiens.NCBI.GRCh38
Dependent Repos 22
jorainer/ensembldb
This is the ensembldb development repository.- * DESCRIPTION
Size: 6.57 MB - Last synced: 4 days ago - Pushed: 21 days ago
lgatto/Pbase
Manipluating and exploring protein and proteomics data- * DESCRIPTION
Size: 24.2 MB - Last synced: 7 months ago - Pushed: over 4 years ago
neurogenomics/MungeSumstats
Rapid standardisation and quality control of GWAS or QTL summary statistics- * DESCRIPTION
Size: 8.7 MB - Last synced: 4 days ago - Pushed: 4 days ago
Bioconductor/GenomeInfoDb
Utilities for manipulating chromosome names, including modifying them to follow a particular naming style- * DESCRIPTION
Size: 83 MB - Last synced: 4 days ago - Pushed: 6 days ago
Bioconductor/BSgenome
Software infrastructure for efficient representation of full genomes and their SNPs- * DESCRIPTION
Size: 11.3 MB - Last synced: 4 days ago - Pushed: 6 days ago
r-pkg-team/r-bioc-genomeinfodb
r-bioc-genomeinfodb packaging- * DESCRIPTION
Last synced: about 1 year ago
Przemol/seqplots_osx
SeqPlots OS X package- * SeqPlots.app/Contents/Resources/Rbin/Versions/3.2/Resources/library/GenomeInfoDb/DESCRIPTION
Size: 502 MB - Last synced: about 1 year ago - Pushed: over 7 years ago
guillaumecharbonnier/colab-r-libs
A test to see how I could save installation time for R libs each time I start a Colab notebook- * GenomeInfoDb/DESCRIPTION
Size: 156 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
cran/SNPassoc
:exclamation: This is a read-only mirror of the CRAN R package repository. SNPassoc — SNPs-Based Whole Genome Association Studies. Homepage: https://github.com/isglobal-brge/SNPassoc- * DESCRIPTION
Size: 6.18 MB - Last synced: 6 months ago - Pushed: over 1 year ago
demuellae/muRtools
Fabian's R tools- * DESCRIPTION
Size: 354 KB - Last synced: 8 months ago - Pushed: 8 months ago
dieterich-lab/JACUSA2helper
Auxiliary R package for assessment of JACUSA2 results- * DESCRIPTION
Size: 131 MB - Last synced: about 2 months ago - Pushed: 7 months ago
kendomaniac/embl120215
Exercises for EMBL Course 2015- * DESCRIPTION
Size: 3.96 MB - Last synced: about 1 year ago - Pushed: over 3 years ago
isglobal-brge/SNPassoc
Genetic association studies- * DESCRIPTION
Size: 1.94 MB - Last synced: 6 months ago - Pushed: about 1 year ago
mikelove/alpine
Modeling and correcting fragment sequence bias for RNA-seq- * DESCRIPTION
Size: 1.28 MB - Last synced: 4 days ago - Pushed: about 6 years ago
GreenleafLab/ChrAccR
Analyzing chromatin accessibility data in R- * DESCRIPTION
Size: 10 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
xuqian-git/R_libs
Compiled R dependencies for Solgenomics & Breedbase databases, for faster install of docker etc.- * GenomeInfoDb/DESCRIPTION
Last synced: over 1 year ago
satishgaurav/discoverapp_rubiustx
- * packrat/lib/x86_64-pc-linux-gnu/3.6.3/GenomeInfoDb/DESCRIPTION
Size: 817 MB - Last synced: over 1 year ago
villafup/GenomeInfoDb Fork of Bioconductor/GenomeInfoDb
Utilities for manipulating chromosome names, including modifying them to follow a particular naming style- * DESCRIPTION
Size: 82.7 MB - Last synced: 10 months ago - Pushed: 10 months ago
GoekeLab/bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data- * DESCRIPTION
Size: 637 MB - Last synced: 10 months ago - Pushed: 10 months ago
guillaumecharbonnier/colab-r-libs-gviz
R libraries installed in Colab to use Gviz- * BSgenome/DESCRIPTION
- * GenomeInfoDb/DESCRIPTION
Size: 144 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
demuellae/muBioAnnotatR
R package for annotating biological entities- * DESCRIPTION
Size: 40 KB - Last synced: 8 months ago - Pushed: over 3 years ago
wenweixiong/MARVEL
- >= 1.3.1000 DESCRIPTION
Size: 12.1 MB - Last synced: 7 months ago - Pushed: 7 months ago
GenomicsNX/bambu Fork of GoekeLab/bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data- * DESCRIPTION
Size: 97.9 MB - Last synced: 28 days ago - Pushed: about 3 years ago
GenomicsNX/alpine Fork of mikelove/alpine
Modeling and correcting fragment sequence bias for RNA-seq- * DESCRIPTION
Size: 577 KB - Last synced: 28 days ago - Pushed: over 7 years ago
bioc/MungeSumstats
This is a read-only mirror of the git repos at https://bioconductor.org- * DESCRIPTION
Size: 8.49 MB - Last synced: 1 day ago - Pushed: 1 day ago
isilta/BSgenome-canFam4 Fork of Bioconductor/BSgenome
Software infrastructure for efficient representation of full genomes and their SNPs- * DESCRIPTION
Size: 11.3 MB - Last synced: 10 months ago - Pushed: 10 months ago
Schaudge/bambu Fork of GoekeLab/bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data- * DESCRIPTION
Size: 548 MB - Last synced: 18 days ago - Pushed: 18 days ago
mykmal/MungeSumstats Fork of neurogenomics/MungeSumstats
Rapid standardisation and quality control of GWAS or QTL summary statistics- * DESCRIPTION
Size: 7.63 MB - Last synced: 6 months ago - Pushed: 6 months ago
jleechung/bambu Fork of GoekeLab/bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data- * DESCRIPTION
Size: 97.9 MB - Last synced: 10 months ago - Pushed: almost 3 years ago
cran/MARVEL
:exclamation: This is a read-only mirror of the CRAN R package repository. MARVEL — Revealing Splicing Dynamics at Single-Cell Resolution- >= 1.3.1000 DESCRIPTION
Size: 6.05 MB - Last synced: 9 months ago - Pushed: over 1 year ago
bioc/GenomeInfoDb
This is a read-only mirror of the git repos at https://bioconductor.org- * DESCRIPTION
Size: 82.9 MB - Last synced: 5 days ago - Pushed: 5 days ago
Mordziarz/bambu Fork of GoekeLab/bambu
Reference-guided transcript discovery and quantification for long read RNA-Seq data- * DESCRIPTION
Size: 637 MB - Last synced: 8 months ago - Pushed: 8 months ago
lingminhao/bambu
bambu for singlecell- * DESCRIPTION
Size: 654 MB - Last synced: 5 months ago - Pushed: 7 months ago
dauss75/galaxy-R3.2.5
R3.2.5- * 3.2.5/R-3.2.5/lib/R/library/GenomeInfoDb/DESCRIPTION
Size: 162 MB - Last synced: 3 months ago - Pushed: over 7 years ago
cruk-mi/mesa
mesa package for Methylation Enrichment Sequencing Analysis- * DESCRIPTION
Size: 24.9 MB - Last synced: 4 days ago - Pushed: 5 days ago
IudiHub/BAMAlignR
An innovative R package designed for genomic data analysis. It efficiently reads BAM files, extracts specific read entries, and visualizes precise read-to-genome alignments based on the CIGAR string. With BAMAlignR, researchers can gain deeper insights into genomic variations and structural variants, enhancing their analytical workflows.- * DESCRIPTION
Size: 2.46 MB - Last synced: about 2 months ago - Pushed: about 2 months ago
bioc/NanoporeRNASeq
This is a read-only mirror of the git repos at https://bioconductor.org- * DESCRIPTION
Size: 107 MB - Last synced: 1 day ago - Pushed: 1 day ago
alyssa-calico/ChrAccR
- * DESCRIPTION
Size: 9.82 MB - Last synced: about 1 month ago - Pushed: about 1 month ago
bioc/BSgenome
This is a read-only mirror of the git repos at https://bioconductor.org- * DESCRIPTION
Size: 11.3 MB - Last synced: 5 days ago - Pushed: 5 days ago
alyssa-calico/ChrAccRMACS
- * DESCRIPTION
Size: 9.88 MB - Last synced: about 1 month ago - Pushed: about 1 month ago