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GitHub / LieberInstitute / recount3

Explore and download data from the recount3 project

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/LieberInstitute%2Frecount3

Stars: 27
Forks: 4
Open Issues: 19

License: None
Language: R
Repo Size: 2.7 MB
Dependencies: 30

Created: about 4 years ago
Updated: 20 days ago
Last pushed: 20 days ago
Last synced: 20 days ago

Topics: annotation-agnostic, bioconductor, count, derfinder, exon, gene, human, illumina, junction, mouse, r, recount, recount3, rnaseq, rstats

Files

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Readme

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Dependencies

DESCRIPTION cran

SummarizedExperiment * depends
BiocFileCache * imports
GenomicRanges * imports
Matrix * imports
R.utils * imports
RCurl * imports
S4Vectors * imports
data.table * imports
methods * imports
rtracklayer * imports
sessioninfo * imports
tools * imports
utils * imports
BiocStyle * suggests
RefManageR * suggests
covr * suggests
interactiveDisplayBase * suggests
knitcitations * suggests
knitr * suggests
pryr * suggests
recount * suggests
rmarkdown * suggests
testthat * suggests

.github/workflows/check-bioc.yml actions

JamesIves/github-pages-deploy-action releases/v4 composite
actions/cache v3 composite
actions/checkout v3 composite
actions/upload-artifact master composite
docker/build-push-action v1 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite