LieberInstitute/recountWorkflow

Public repo for the recount Bioconductor workflow that is visible at http://bioconductor.org/help/workflows/

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leekgroup/recount

R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/

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LieberInstitute/recount3

Explore and download data from the recount3 project

Language: R - Size: 2.7 MB - Last synced: 22 days ago - Pushed: 22 days ago - Stars: 27 - Forks: 4

leekgroup/derfinderPlot

Plotting functions for derfinder results

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leekgroup/derfinderHelper

Helper package for derfinder

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leekgroup/derfinderData

Example data used by the derfinder and derfinderData Bioconductor packages

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lcolladotor/derfinder

Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches

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leekgroup/derSupplement

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LieberInstitute/GenomicState

Build and access GenomicState objects for use with derfinder tools from sources like Gencode

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LieberInstitute/dbFinder

dbFinder code

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LieberInstitute/recountWorkshop2020

BioC2020 workshop: Human RNA-seq data from recount2 and related packages

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leekgroup/regionReport

Generate HTML report for a set of genomic regions or DESeq2/edgeR results

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dzhang32/ER_paper_2020_supp_code

Supplementary code for the paper: Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders

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dzhang32/ODER

Optimising the Definitions of Expressed Regions

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LieberInstitute/recountWorkshop2019

Workshop proposal for BioC2019 centered around the recount2 resource

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LieberInstitute/recountWorkshop

Package for the recount workshop for BioC2017

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