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GitHub / MANO-B / MicroSEC
MicroSEC filtering pipeline for FFPE artifacts
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MANO-B%2FMicroSEC
Stars: 7
Forks: 1
Open Issues: 1
License: mit
Language: Jupyter Notebook
Repo Size: 7.25 MB
Dependencies:
19
Created: over 3 years ago
Updated: 10 months ago
Last pushed: about 1 year ago
Last synced: 6 months ago
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Dependencies
DESCRIPTION
cran
- R >= 3.4.0 depends
- BiocGenerics * imports
- Biostrings * imports
- GenomeInfoDb * imports
- GenomicAlignments * imports
- R.utils * imports
- Rsamtools * imports
- data.table * imports
- dplyr * imports
- gtools * imports
- magrittr * imports
- openxlsx * imports
- stringr * imports
- tidyr * imports
- BSgenome.Hsapiens.UCSC.hg19 * suggests
- BSgenome.Hsapiens.UCSC.hg38 * suggests
- BSgenome.Mmusculus.UCSC.mm10 * suggests
- knitr * suggests
- rmarkdown * suggests