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GitHub / Rafael-Silva-Oliveira / STNav
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Rafael-Silva-Oliveira%2FSTNav
Stars: 0
Forks: 0
Open Issues: 0
License: mit
Language: Python
Repo Size: 34 MB
Dependencies:
471
Created: about 2 months ago
Updated: about 1 month ago
Last pushed: about 1 month ago
Last synced: about 1 month ago
Files
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Readme
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Dependencies
requirements.txt
pypi
- Babel ==2.13.1
- ConfigArgParse ==1.7
- Cython ==3.0.7
- GitPython ==3.1.37
- GraphST ==1.1.1
- HeapDict ==1.0.1
- ImageHash ==4.3.1
- Jinja2 ==3.1.2
- Mako ==1.3.2
- Markdown ==3.5
- MarkupSafe ==2.1.3
- NaiveDE ==1.2.0
- PIMS ==0.6.1
- POT ==0.9.3
- Pillow ==10.0.1
- Pint ==0.22
- PuLP ==2.7.0
- PyJWT ==2.8.0
- PyOpenGL ==3.1.7
- PyPDF2 ==3.0.1
- PyQt5 ==5.15.10
- PyQt5-Qt5 ==5.15.2
- PyQt5-sip ==12.13.0
- PySocks ==1.7.1
- PyWavelets ==1.4.1
- PyYAML ==6.0.1
- Pygments ==2.16.1
- QtPy ==2.4.1
- SQLAlchemy ==2.0.27
- SpatialDE ==1.1.3
- SpatialDM ==0.1.0
- Sphinx ==7.2.6
- Werkzeug ==3.0.1
- absl-py ==2.0.0
- adjustText ==0.8
- aiobotocore ==2.5.4
- aiohttp ==3.8.6
- aioitertools ==0.11.0
- aiosignal ==1.3.1
- alabaster ==0.7.13
- alembic ==1.13.1
- altair ==5.1.2
- anndata ==0.10.3
- annotated-types ==0.6.0
- annoy ==1.17.3
- ansicon ==1.89.0
- anyio ==3.7.1
- appdirs ==1.4.4
- array-api-compat ==1.4
- arrow ==1.3.0
- asciitree ==0.3.3
- asttokens ==2.4.0
- astunparse ==1.6.3
- async-timeout ==4.0.3
- attrs ==23.2.0
- autoflake ==2.3.1
- backcall ==0.2.0
- backoff ==2.2.1
- bcbio-gff ==0.7.0
- beautifulsoup4 ==4.12.2
- binaryornot ==0.4.4
- biopython ==1.81
- bleach ==6.1.0
- blessed ==1.20.0
- blinker ==1.6.3
- bokeh ==3.3.0
- boto3 ==1.28.72
- botocore ==1.31.85
- bottle ==0.12.25
- build ==1.0.3
- cachetools ==5.3.1
- cachey ==0.2.1
- catboost ==1.2.3
- cell2location ==0.1.3
- celltypist ==1.6.2
- certifi ==2023.7.22
- cffi ==1.16.0
- cfgv ==3.4.0
- chardet ==5.2.0
- charset-normalizer ==3.3.0
- chex ==0.1.7
- click ==8.1.7
- click-plugins ==1.1.1
- cligj ==0.7.2
- cloudpickle ==3.0.0
- colorama ==0.4.6
- colorcet ==3.0.1
- colorlog ==6.8.2
- comm ==0.1.4
- connection-pool ==0.0.3
- contextlib2 ==21.6.0
- contourpy ==1.1.1
- cookiecutter ==2.4.0
- croniter ==1.4.1
- curl_cffi ==0.6.2
- cycler ==0.12.1
- dacite ==1.8.1
- dask ==2023.10.0
- dask-image ==2023.8.1
- dataclasses ==0.6
- dataclasses-json ==0.5.14
- datashader ==0.16.0
- dateutils ==0.6.12
- datrie ==0.8.2
- debugpy ==1.8.0
- decorator ==4.4.2
- deepdiff ==6.6.1
- deeplake ==3.8.22
- dill ==0.3.8
- diskcache ==5.6.3
- distlib ==0.3.7
- distributed ==2023.10.0
- distro ==1.9.0
- dm-tree ==0.1.8
- docker ==7.0.0
- docopt ==0.6.2
- docrep ==0.3.2
- docstring-parser ==0.15
- docutils ==0.20.1
- dpath ==2.1.6
- duckduckgo_search ==4.5.0
- edgepy ==0.1.33.dev0
- et-xmlfile ==1.1.0
- etils ==1.5.2
- exceptiongroup ==1.1.3
- executing ==2.0.0
- fastapi ==0.104.0
- fasteners ==0.19
- fastjsonschema ==2.18.1
- fbpca ==1.0
- filelock ==3.12.4
- fiona ==1.9.5
- flatbuffers ==23.5.26
- flax ==0.7.4
- fonttools ==4.43.1
- freetype-py ==2.4.0
- frozenlist ==1.4.0
- fsspec ==2023.6.0
- gast ==0.4.0
- gdown ==5.1.0
- geopandas ==0.14.0
- geosketch ==1.2
- gitdb ==4.0.10
- google-auth ==2.23.3
- google-auth-oauthlib ==0.4.6
- google-pasta ==0.2.0
- graphviz ==0.20.1
- greenlet ==3.0.3
- grpcio ==1.59.0
- gseapy ==1.0.6
- h11 ==0.14.0
- h5py ==3.10.0
- hilearn ==0.2.2
- holoviews ==1.18.3
- hsluv ==5.0.4
- htmlmin ==0.1.12
- httpcore ==1.0.4
- httpx ==0.27.0
- huggingface-hub ==0.21.4
- humanfriendly ==10.0
- humbug ==0.3.2
- identify ==2.5.33
- idna ==3.4
- igraph ==0.10.8
- imageio ==2.31.6
- imagesize ==1.4.1
- importlib-metadata ==6.8.0
- importlib-resources ==6.1.0
- inflect ==7.0.0
- inquirer ==3.1.3
- intervaltree ==3.1.0
- ipykernel ==6.26.0
- ipython ==8.16.1
- ipython-genutils ==0.2.0
- ipywidgets ==8.1.1
- isort ==5.13.2
- itsdangerous ==2.1.2
- jax ==0.4.19
- jaxlib ==0.4.19
- jedi ==0.19.1
- jinxed ==1.2.0
- jmespath ==1.0.1
- joblib ==1.3.2
- jsonpatch ==1.33
- jsonpointer ==2.4
- jsonschema ==4.19.1
- jsonschema-specifications ==2023.7.1
- jupyter_client ==8.5.0
- jupyter_core ==5.4.0
- jupyterlab-widgets ==3.0.9
- keras ==2.11.0
- kiwisolver ==1.4.5
- langchain ==0.0.208
- langchain-community ==0.0.25
- langchain-core ==0.1.29
- langchain-text-splitters ==0.0.1
- langchainplus-sdk ==0.0.20
- langsmith ==0.1.20
- lazy_loader ==0.3
- leidenalg ==0.10.1
- lets-plot ==4.0.1
- libclang ==16.0.6
- libpysal ==4.9.2
- lightgbm ==4.3.0
- lightning ==2.0.9.post0
- lightning-cloud ==0.5.44
- lightning-utilities ==0.9.0
- linkify-it-py ==2.0.3
- llvmlite ==0.41.0
- locket ==1.0.0
- loguru ==0.7.2
- looseversion ==1.3.0
- louvain ==0.8.1
- lxml ==5.1.0
- lz4 ==4.3.3
- magicgui ==0.8.0
- markdown-it-py ==3.0.0
- marshmallow ==3.21.1
- matplotlib ==3.8.0
- matplotlib-inline ==0.1.6
- matplotlib-scalebar ==0.8.1
- matplotlib-venn ==0.11.10
- mdit-py-plugins ==0.4.0
- mdurl ==0.1.2
- mizani ==0.9.3
- ml-collections ==0.1.1
- ml-dtypes ==0.3.1
- mpmath ==1.3.0
- msgpack ==1.0.7
- mudata ==0.2.3
- multidict ==6.0.4
- multimethod ==1.11
- multipledispatch ==1.0.0
- multiprocess ==0.70.16
- multiscale_spatial_image ==0.11.2
- muon ==0.1.5
- mypy-extensions ==1.0.0
- napari ==0.4.15
- napari-console ==0.0.9
- napari-plugin-engine ==0.2.0
- napari-svg ==0.1.10
- natsort ==8.4.0
- nbformat ==5.9.2
- nest-asyncio ==1.5.8
- networkx ==3.1
- newick ==1.0.0
- nodeenv ==1.8.0
- npe2 ==0.7.3
- numba ==0.58.0
- numcodecs ==0.12.1
- numexpr ==2.9.0
- numpy ==1.23.4
- numpydoc ==1.6.0
- numpyro ==0.13.2
- oauthlib ==3.2.2
- ome-zarr ==0.8.2
- omnipath ==1.0.7
- openai ==0.27.8
- openapi-schema-pydantic ==1.2.4
- opencv-python ==4.8.1.78
- openpyxl ==3.1.2
- opt-einsum ==3.3.0
- optax ==0.1.7
- optuna ==3.5.0
- optuna-dashboard ==0.14.0
- orbax-checkpoint ==0.4.1
- ordered-set ==4.1.0
- orjson ==3.9.15
- outcome ==1.3.0.post0
- packaging ==23.2
- palettable ==3.3.3
- pandas ==1.5.3
- pandas-profiling ==3.6.6
- panel ==1.3.8
- param ==2.0.0
- parso ==0.8.3
- partd ==1.4.1
- pathos ==0.3.2
- patsy ==0.5.3
- phik ==0.12.4
- pickleshare ==0.7.5
- pinecone-client ==3.1.0
- pipreqs ==0.4.13
- plac ==1.4.0
- platformdirs ==3.11.0
- plotly ==5.17.0
- plotnine ==0.12.3
- pox ==0.3.4
- ppft ==1.7.6.8
- pre-commit ==3.5.0
- prompt-toolkit ==3.0.39
- protobuf ==3.20.0
- psutil ==5.9.6
- psygnal ==0.9.4
- pure-eval ==0.2.2
- pyarrow ==13.0.0
- pyasn1 ==0.5.0
- pyasn1-modules ==0.3.0
- pyconify ==0.1.6
- pycparser ==2.21
- pyct ==0.5.0
- pydantic ==2.6.3
- pydantic_core ==2.16.3
- pydeck ==0.8.1b0
- pydeseq2 ==0.4.1
- pyflakes ==3.2.0
- pygeos ==0.14
- pynndescent ==0.5.10
- pyparsing ==3.1.1
- pypng ==0.20220715.0
- pyproj ==3.6.1
- pyproject_hooks ==1.0.0
- pyreadline3 ==3.4.1
- pyro-api ==0.1.2
- pyro-ppl ==1.8.6
- python-dateutil ==2.8.2
- python-dotenv ==1.0.1
- python-editor ==1.0.4
- python-multipart ==0.0.6
- python-slugify ==8.0.1
- pytorch-lightning ==2.1.0
- pytz ==2023.3.post1
- pyviz_comms ==3.0.1
- pywin32 ==306
- pyzmq ==25.1.1
- qtconsole ==5.4.4
- read-roi ==1.6.0
- readchar ==4.0.5
- referencing ==0.30.2
- regex ==2023.12.25
- regional ==1.1.2
- requests ==2.31.0
- requests-oauthlib ==1.3.1
- reretry ==0.11.8
- rich ==13.6.0
- rpds-py ==0.10.6
- rsa ==4.9
- s3fs ==2023.6.0
- s3transfer ==0.7.0
- sacremoses ==0.1.1
- safetensors ==0.4.2
- sanbomics ==0.1.0
- scArches ==0.5.10
- scHPL ==1.0.5
- scanorama ==1.7.4
- scanpy ==1.9.6
- scikit-image ==0.20.0
- scikit-learn ==1.3.1
- scikit-misc ==0.3.1
- scipy ==1.11.3
- scrublet ==0.2.3
- scvi-tools ==1.0.4
- seaborn ==0.12.2
- seagal ==2.5.2
- selenium ==4.18.1
- semantic-version ==2.10.0
- seqtk ==0.5.0
- session-info ==1.0.0
- shap ==0.44.1
- shapely ==2.0.2
- showit ==1.1.4
- six ==1.16.0
- slicedimage ==4.1.1
- slicer ==0.0.7
- slicerator ==1.1.0
- smart-open ==6.4.0
- smmap ==5.0.1
- snakemake ==7.32.3
- sniffio ==1.3.0
- snowballstemmer ==2.2.0
- sortedcontainers ==2.4.0
- soupsieve ==2.5
- sparse ==0.14.0
- spatial_image ==0.3.0
- spatialdata ==0.0.15
- sphinxcontrib-applehelp ==1.0.7
- sphinxcontrib-devhelp ==1.0.5
- sphinxcontrib-htmlhelp ==2.0.4
- sphinxcontrib-jsmath ==1.0.1
- sphinxcontrib-qthelp ==1.0.6
- sphinxcontrib-serializinghtml ==1.1.9
- squidpy ==1.3.1
- stack-data ==0.6.3
- starfish ==0.2.2
- starlette ==0.27.0
- starsessions ==1.3.0
- statsmodels ==0.13.2
- stdlib-list ==0.9.0
- stlearn ==0.4.12
- stopit ==1.1.2
- streamlit ==1.31.1
- streamlit-ace ==0.1.1
- streamlit-pandas-profiling ==0.1.3
- superqt ==0.6.1
- sympy ==1.5.1
- tabulate ==0.9.0
- tangled-up-in-unicode ==0.2.0
- tangram ==0.7.0
- tblib ==3.0.0
- tenacity ==8.2.3
- tensorboard ==2.11.2
- tensorboard-data-server ==0.6.1
- tensorboard-plugin-wit ==1.8.1
- tensorflow ==2.11.1
- tensorflow-estimator ==2.11.0
- tensorflow-intel ==2.11.1
- tensorflow-io-gcs-filesystem ==0.31.0
- tensorstore ==0.1.46
- termcolor ==2.3.0
- text-unidecode ==1.3
- texttable ==1.7.0
- threadpoolctl ==3.2.0
- throttler ==1.2.2
- tifffile ==2023.9.26
- tiktoken ==0.6.0
- tokenizers ==0.15.2
- toml ==0.10.2
- tomli ==2.0.1
- tomli_w ==1.0.0
- toolz ==0.12.0
- toposort ==1.10
- torch ==2.1.0
- torch-tb-profiler ==0.4.3
- torchmetrics ==1.2.0
- tornado ==6.3.3
- tqdm ==4.66.1
- trackpy ==0.6.1
- traitlets ==5.11.2
- transformers ==4.38.2
- trio ==0.25.0
- trio-websocket ==0.11.1
- typeguard ==4.1.5
- typer ==0.9.0
- types-python-dateutil ==2.8.19.14
- typing-inspect ==0.9.0
- typing_extensions ==4.10.0
- tzdata ==2023.3
- tzlocal ==5.1
- uc-micro-py ==1.0.3
- umap-learn ==0.5.4
- urllib3 ==1.26.18
- uvicorn ==0.23.2
- validators ==0.22.0
- virtualenv ==20.25.0
- visions ==0.7.5
- vispy ==0.14.1
- watchdog ==3.0.0
- wcwidth ==0.2.8
- webencodings ==0.5.1
- websocket-client ==1.6.4
- websockets ==12.0
- widgetsnbextension ==4.0.9
- wikipedia ==1.4.0
- win32-setctime ==1.1.0
- wordcloud ==1.9.3
- wrapt ==1.15.0
- wsproto ==1.2.0
- xarray ==2023.10.1
- xarray-dataclasses ==1.7.0
- xarray-datatree ==0.0.12
- xarray-schema ==0.0.3
- xarray-spatial ==0.3.7
- xgboost ==2.0.3
- xyzservices ==2023.10.1
- yarg ==0.1.9
- yarl ==1.9.2
- ydata-profiling ==4.6.4
- yte ==1.5.1
- zarr ==2.16.1
- zict ==3.0.0
- zipp ==3.17.0
setup.py
pypi