superqt | pypi | Package Usage | Ecosyste.ms: Repos

yfukai/napari-travali

Cell track editor based on napari

0.3.2 poetry.lock
==0.2.5.post1 requirement.txt
==0.3.0 requirements.txt

Size: 36.8 MB - Last synced: 2 months ago - Pushed: 11 months ago

jo-mueller/napari-stl-exporter

Napari plugin to export stl files

==0.2.4 requirements.txt

Size: 4.48 MB - Last synced: 29 days ago - Pushed: 10 months ago

aics-int/napari-allencell-annotator

==0.3.2 napari_allencell_annotator/_tests/widgets/requirements.txt

Size: 20 MB - Last synced: 15 days ago - Pushed: over 1 year ago

haesleinhuepf/napari-accelerated-pixel-and-object-classification

GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.

* requirements.txt

Size: 47.7 MB - Last synced: 20 days ago - Pushed: 7 months ago

linien-org/linien

Spectroscopy lock application using RedPitaya

==0.2.3 requirements_gui.txt

Size: 5.21 MB - Last synced: 12 days ago - Pushed: 13 days ago

labsyspharm/scimap

Spatial Single-Cell Analysis Toolkit

0.3.1 poetry.lock

Size: 42.2 MB - Last synced: 5 days ago - Pushed: 6 days ago

LaboratoryOpticsBiosciences/bioimageloader-docs

docs for bioimageloader

==0.3.1 requirements.txt

Size: 28.5 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

gill14/AccuPatt

A software tool for agricultural aircraft spray pattern testing. This includes measuring tracer dye deposition on string collectors and measuring droplet deposition from spray cards.

0.3.3 poetry.lock
^0.3.3 pyproject.toml

Size: 96.5 MB - Last synced: 4 months ago - Pushed: 4 months ago

hjmh/fly2p

utility functions for analyzing (fly) calcium imaging data

0.3.3 poetry.lock

Size: 39.5 MB - Last synced: 9 months ago - Pushed: 9 months ago

GirlsOfSteelRobotics/GirlsOfSteelFRC

==0.3.1 requirements.txt

Size: 217 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

arkitektio-apps/mikro-napari

napari within the mikro environment

0.3.2 poetry.lock

Size: 1.04 MB - Last synced: 21 days ago - Pushed: 4 months ago

bobfromjapan/behavior_annotator

behavior annotator with napari

==0.3.1 requirements.txt

Size: 17.6 KB - Last synced: 8 months ago - Pushed: about 2 years ago

ladisk/hcc_python_tools

==0.3.3 requirements.txt

Size: 20 MB - Last synced: 12 months ago - Pushed: almost 2 years ago

vspavl99/FastOrgansLocalizationOnCT

0.3.3 poetry.lock

Size: 520 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

IAWG-CSBC-PSON/hack2022-01-artifacts

Challenge 1: Automated Detection of Microscopy Artifacts

==0.2.5.post1 requirements.txt

Size: 17.1 MB - Last synced: 6 months ago - Pushed: 7 months ago

spaceskynet/danser-gui

A Gui Application made for DANSER.

* requirements.txt

Size: 1.83 MB - Last synced: 8 months ago - Pushed: almost 2 years ago

fractal-analytics-platform/fractal-server

server side part of fractal

0.3.5 poetry.lock

Size: 117 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

Kapoorlabs-paris/goodplaceintroduction

Basic structure of a python package: Python course for developers

==0.3.3 Pipfile.lock

Size: 52.7 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago

fractal-analytics-platform/fractal-tasks-core

Main tasks for the Fractal analytics platform

0.3.5 poetry.lock

Size: 13.1 MB - Last synced: about 2 months ago - Pushed: about 2 months ago

MBPhys/napari-elementary-numpy-operations

A napari plugin covers elementary numpy operations like swap axes, flip, sqeeze an array or rotate an arrays by 90° steps

* requirements.txt

Size: 7.81 KB - Last synced: 24 days ago - Pushed: over 2 years ago

haesleinhuepf/napari-brightness-contrast

* requirements.txt

Size: 46.7 MB - Last synced: 1 day ago - Pushed: over 1 year ago

tcotte/napari-IDS

==0.3.0 requirements.txt

Size: 3.58 MB - Last synced: 25 days ago - Pushed: about 2 years ago

ebouilhol/napari-DeepSpot

==0.2.5.post1 requirements.txt

Size: 86.1 MB - Last synced: 24 days ago - Pushed: over 2 years ago

mpicbg-csbd/napari-kics

A plugin to estimate chromosome sizes from karyotype images.

==0.3.2 Pipfile.lock

Size: 8.15 MB - Last synced: about 1 month ago - Pushed: almost 2 years ago

chili-chiu/binder_test

==0.3.5 requirements.txt

Size: 3.91 KB - Last synced: about 1 year ago - Pushed: over 1 year ago

ijbrewster/tropomi_gui

* requirements.txt

Size: 649 MB - Last synced: over 1 year ago

hermlon/diafilm

A small GUI utility to capture pictures from webcam based slide film scanners such as the SilverCrest Negative Digitiser SND 3600

==0.2.1 requirements.txt

Size: 241 KB - Last synced: over 1 year ago - Pushed: over 2 years ago

pyapp-kit/magicgui

build GUIs from type annotations

>=0.4.0 pyproject.toml

Size: 39.7 MB - Last synced: 17 days ago - Pushed: 27 days ago

napari/napari-workshop-template

A template for napari workshops

==0.3.5 requirements.txt

Size: 27.1 MB - Last synced: 11 days ago - Pushed: 11 days ago

cps-lab-saga/image-processing-widget

GUI to explore OpenCV image processing functions

0.3.8 poetry.lock
^0.3.8 pyproject.toml
==0.3.5 requirements.txt

Size: 744 KB - Last synced: 12 months ago - Pushed: over 1 year ago

ianhi/pymmcore-widgets Fork of pymmcore-plus/pymmcore-widgets

A set of Qt-based widgets onto the pymmcore-plus model

>=0.3.1 pyproject.toml

Size: 1.26 MB - Last synced: about 1 month ago - Pushed: 10 months ago

Iain-S/AdventOfPython

Advent of Code 2022/3, in Python

==0.4.1 requirements.txt

Size: 200 KB - Last synced: about 2 months ago - Pushed: 6 months ago

llimeht/sasview Fork of SasView/sasview

Code for the SasView application. Builds can be found here: https://jenkins.esss.dk/sasview/

* build_tools/requirements.txt

Size: 209 MB - Last synced: 9 months ago - Pushed: over 1 year ago

davidpross/napari Fork of napari/napari

napari: a fast, interactive, multi-dimensional image viewer for python

>=0.3.0 requirements.txt

Size: 29.7 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

EDF-Lab/eVDriveFlow

EDF R&D implementation of ISO 15118-20.

==0.2.1 requirement_rasp.txt

Size: 4.42 MB - Last synced: 4 months ago - Pushed: about 1 year ago

potating-potato/napari Fork of napari/napari

napari: a fast, interactive, multi-dimensional image viewer for python

>=0.3.0 requirements.txt

Size: 28.4 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

Quorumetrix/cellPLATO

==0.3.2 cellPLATO/environment.yml

Size: 250 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

nickeener/starfish Fork of spacetx/starfish

starfish: unified pipelines for image-based transcriptomics

==0.3.2 requirements/REQUIREMENTS-NAPARI-CI.txt

Size: 114 MB - Last synced: 3 months ago - Pushed: 3 months ago

yutaro-n/napari Fork of napari/napari

napari: a fast, interactive, multi-dimensional image viewer for python

==0.5.0 resources/requirements_mypy.txt

Size: 74.8 MB - Last synced: 30 days ago - Pushed: 30 days ago

Benjamin-Fouquet/Readaptathon

Repo IMT pour le readaptathon 2022 à Rennes

==0.4.1 requirements.txt

Size: 5.1 MB - Last synced: 2 months ago - Pushed: over 1 year ago

tlambert03/magicgui Fork of pyapp-kit/magicgui

build GUIs from python functions, using magic.

>=0.4.0 setup.py

Size: 22.3 MB - Last synced: 5 days ago - Pushed: 6 days ago

Czaki/napari Fork of napari/napari

napari: a fast, interactive, multi-dimensional image viewer for python

>=0.3.0 requirements.txt

Size: 34.2 MB - Last synced: 11 days ago - Pushed: 11 days ago

ctcisar/starfish Fork of spacetx/starfish

starfish: unified pipelines for image-based transcriptomics

==0.3.2 requirements/REQUIREMENTS-NAPARI-CI.txt

Size: 114 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

jouyun/Mann_2023

==0.4.0 environment.yml

Size: 16.6 KB - Last synced: 10 months ago - Pushed: over 1 year ago

ndcn/infer-subc

A plugin for multi-channel image segmentation (hard fork/hack from Allen Institute for Cell Science)

==0.3.3 requirements.txt

Size: 32.5 MB - Last synced: 19 days ago - Pushed: 24 days ago

MathOnco/Mistic_code_live_cell_imaging

==0.2.5.post1 code/.ipynb_checkpoints/requirements_11-checkpoint.txt

Size: 73.6 MB - Last synced: about 1 month ago - Pushed: over 1 year ago

OSU-BMBL/NOTCH1-cardiac-lineage-scRNAseq

Impaired Human Cardiac Cell Development due to NOTCH1 Deficiency

==0.3.0 NOTCH1_python_requirements.txt

Size: 103 MB - Last synced: 28 days ago - Pushed: about 1 year ago

007gzs/test

* requirements.txt

Size: 1.6 MB - Last synced: 5 months ago - Pushed: 5 months ago

super-resolution/Solvie-et-al-supplement

Code supplement to Solvie et al. 2022

==0.3.5 requirements/py39-requirements.txt

Size: 13.5 MB - Last synced: 22 days ago - Pushed: over 1 year ago

IMCF-Biocev/Simonik2022

The project aims to measure and analyse the change of angle between cell and sperm cell during their interaction.

=0.2.5.post1=pyhd8ed1ab_0 requirements.txt

Size: 82 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago

IMCF-Biocev/Tavakoli2022

The project measures axonal growth speed and direction during development. Conducted at IMCF Biocev in collaboration with Mitra Tavakoli, Institute of Biotechnology of the Czech Academy of Sciences.

==0.3.8 cfg/environment.yml

Size: 1.51 MB - Last synced: almost 1 year ago - Pushed: over 1 year ago

eyalk11/compare-my-stocks

A system for visualizing interesting stocks. Has powerful comparison capabilities and works seamlessly with your jupyter notebook. Written in QT with matplotlib.

* requirements.txt

Size: 3.08 MB - Last synced: 23 days ago - Pushed: 4 months ago

rouault-team-public/electrophysiology/anaephys

==0.4.1 dev-requirements.txt
* pyproject.toml
==0.4.1 requirements.txt

Last synced: 12 months ago

Haas-Lab/Label_Seg_Program

Repository is created to organize the development of a ground-truth volume labeling program.

=0.3.2=pyhd8ed1ab_0 requirements_m1.txt

Size: 478 MB - Last synced: 2 months ago - Pushed: 11 months ago

MikeVolk/QDMpy

^0.3.5 pyproject.toml

Size: 62.7 MB - Last synced: 10 months ago - Pushed: about 1 year ago

migaku-official/migaku-ocr

0.4.1 poetry.lock
^0.4.1 pyproject.toml

Size: 1.69 MB - Last synced: over 1 year ago - Pushed: over 1 year ago

carlottacode/mscproject

==0.4.1 environment.yml

Size: 6.84 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

Tgnink/mfspine

dendritic spine annotation plugin for fluorescent microscopy and training scripts

==0.4.1 all_requirements.txt

Size: 18.1 MB - Last synced: 11 months ago - Pushed: 12 months ago

Oneirag/yt2mp3

Downloads mp3 from youtube and equializes it

* requirements.txt

Size: 75.2 KB - Last synced: 9 months ago - Pushed: 9 months ago

uplay1007/Life_simulation

* requirements.txt

Size: 1.41 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

luke-rooney/SHABPGUI

==0.4.1 requirements.txt

Size: 51.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago

luke-rooney/SHABPPlayground

ShabpTutorial

==0.4.1 requirements.txt

Size: 188 MB - Last synced: about 1 year ago - Pushed: about 1 year ago

DiamondLightSource/python-morgul

Package to manage calibration and correction of Jungfrau images

0.4.1 poetry.lock

Size: 554 KB - Last synced: 9 months ago - Pushed: 9 months ago

GenomicsNX/scimap Fork of labsyspharm/scimap

Spatial Single-Cell Analysis Toolkit

0.3.1 poetry.lock

Size: 8.45 MB - Last synced: about 2 months ago - Pushed: about 2 years ago

Czaki/PyConPL2023

Materials for PyCon2023 presentation

* requirements.in
==0.4.1 requirements.txt

Size: 14.2 MB - Last synced: 11 months ago - Pushed: 11 months ago

ajms/cell_detection

This repo is used for detecting cells in 3d images

0.4.1 poetry.lock

Size: 279 KB - Last synced: about 1 year ago - Pushed: about 1 year ago

skywolf829/APMGSRN

Distributed INRs to learn an encoding of a large-scale volume for query on a local machine with limited computational resources.

* requirements.txt

Size: 812 MB - Last synced: 25 days ago - Pushed: 26 days ago

GrussmayerLab/TPR4Py

TPR4Py is a tool to recover quantitative phase differences from a 3D stack of Koehler illuminated bright field images. It is based on the Matlab script from https://c4science.ch/source/TomPhaseRet/

==0.3.2 environment.yml

Size: 3.45 MB - Last synced: 11 months ago - Pushed: about 2 years ago

BioMeDS/starfish Fork of spacetx/starfish

starfish: unified pipelines for image-based transcriptomics

==0.3.2 requirements/REQUIREMENTS-NAPARI-CI.txt

Size: 88.3 MB - Last synced: about 2 months ago - Pushed: 5 months ago

andy-sweet/napari Fork of napari/napari

napari: a fast, interactive, multi-dimensional image viewer for python

==0.5.2 resources/requirements_mypy.txt

Size: 35.7 MB - Last synced: 5 days ago - Pushed: 5 days ago

docker-parfum/scimap Fork of labsyspharm/scimap

Spatial Single-Cell Analysis Toolkit

0.3.1 poetry.lock

Size: 10.7 MB - Last synced: 10 months ago - Pushed: over 1 year ago

wl-stepp/pymmcore-widgets Fork of pymmcore-plus/pymmcore-widgets

A set of Qt-based widgets onto the pymmcore-plus model

[quantity] >=0.3.1 pyproject.toml

Size: 26.8 MB - Last synced: about 1 month ago - Pushed: about 1 month ago

Li-Boyan/BeadTracking

==0.4.0 environment.yml

Size: 2.15 MB - Last synced: 4 months ago - Pushed: 4 months ago

PetrKursky/napari-segment-anything Fork of jaroslavknotek/napari-segment-anything

Segment Anything Model (SAM) native Qt UI

* requirements.txt

Size: 59.6 KB - Last synced: about 1 month ago - Pushed: 10 months ago

CommanderPho/Spike3DWorkEnv

A super-folder that just contains all Spike3D repos as submodules (subfolders)

==0.4.1 SCRIPTS/exports/pyPhoPlaceCellAnalysis__Wtd_requirements.txt
0.4.1 poetry.lock

Size: 1.16 MB - Last synced: 27 days ago - Pushed: 27 days ago

pmplewa/napari-wsi Fork of AstraZeneca/napari-wsi

A plugin to read whole slide images within napari.

0.4.1 poetry.lock

Size: 2.69 MB - Last synced: 8 months ago - Pushed: 8 months ago

pmplewa/napari-fits

A plugin to read FITS images within napari.

0.4.1 poetry.lock

Size: 174 KB - Last synced: 8 months ago - Pushed: 8 months ago

gdrosos/sasview Fork of SasView/sasview

Code for the SasView application.

* build_tools/requirements.txt

Size: 185 MB - Last synced: 9 months ago - Pushed: 9 months ago

danzllab/CATS

==0.3.3 cocats_image-analysis/environment.yml

Size: 31.3 MB - Last synced: about 1 month ago - Pushed: 9 months ago

animeshbhatt651/Stock-Anology

displaying the performance of the stocks in your portfolio of interest Maximum chart customization choices, along with a variety of comparison options.