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GitHub / Teichlab / cellhint

A tool for semi-automatic cell type harmonization and integration

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Teichlab%2Fcellhint

Stars: 77
Forks: 6
Open Issues: 3

License: mit
Language: Python
Repo Size: 6.78 MB
Dependencies: 20

Created: 10 months ago
Updated: 15 days ago
Last pushed: 5 months ago
Last synced: 15 days ago

Topics: cell-type-harmonization, data-integration, machine-learning, python, scrna-seq, single-cell

Files

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Readme

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Dependencies

docs/requirements.txt pypi

Jinja2 <3.1
annoy >=1.17.0
ipython_genutils ==0.2.0
leidenalg >=0.9.0
myst_parser ==0.15.2
nbsphinx ==0.8.8
numpy >=1.19.0
openpyxl >=3.0.4
pandas >=1.0.5
scanpy >=1.7.0
scikit-learn >=0.24.1
sphinx >=3.5.2
sphinx_rtd_theme >=0.5.1

requirements.txt pypi

annoy >=1.17.0
leidenalg >=0.9.0
numpy >=1.19.0
openpyxl >=3.0.4
pandas >=1.0.5
scanpy >=1.7.0
scikit-learn >=0.24.1

setup.py pypi