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GitHub / akshaips / nf-core-metabolinden

Metabolomics quaLIty coNtrol anD paramEter optimizatioN

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/akshaips%2Fnf-core-metabolinden

Fork of PayamEmami/nf-core-metabolinden
Stars: 0
Forks: 0
Open Issues: 0

License: mit
Language: Nextflow
Repo Size: 2.04 MB
Dependencies: 28

Created: over 1 year ago
Updated: 10 months ago
Last pushed: over 1 year ago
Last synced: 10 months ago

Files

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Readme

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Dependencies

.github/workflows/awsfulltest.yml actions

conda-incubator/setup-miniconda v2 composite

.github/workflows/awstest.yml actions

conda-incubator/setup-miniconda v2 composite

.github/workflows/branch.yml actions

mshick/add-pr-comment v1 composite

.github/workflows/ci.yml actions

actions/checkout v2 composite
technote-space/get-diff-action v4 composite

.github/workflows/linting.yml actions

actions/checkout v2 composite
actions/checkout v1 composite
actions/setup-node v1 composite
actions/setup-python v1 composite
actions/upload-artifact v2 composite
mshick/add-pr-comment v1 composite

.github/workflows/linting_comment.yml actions

dawidd6/action-download-artifact v2 composite
marocchino/sticky-pull-request-comment v2 composite

.github/workflows/push_dockerhub_dev.yml actions

actions/checkout v2 composite

.github/workflows/push_dockerhub_release.yml actions

actions/checkout v2 composite

Dockerfile docker

nfcore/base 1.14 build

environment.yml conda

bioconductor-msstats 3.20.1.*
fonts-conda-ecosystem 1.*
markdown 3.2.2.*
openms 2.8.0.*
openms-thirdparty 2.8.0.*
pygments 2.7.1.*
pymdown-extensions 8.0.1.*
pyopenms 2.8.0.*
r-plotly 4.10.0.*
r-ptxqc 1.0.5.*
sdrf-pipelines 0.0.9.*
xorg-libxt 1.2.0.*