Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
Package Usage: conda: xorg-libxt
3 versions
Latest release: over 3 years ago
28 dependent packages
View more package details: https://packages.ecosyste.ms/registries/anaconda.org/packages/xorg-libxt
Dependent Repos 131
brucemoran/tumour_only
Tumour-only DNA sequencing analysis- 1.2.1 environment.yaml
Size: 58.6 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
connectome-neuprint/neuprint-python
Python client utilties for interacting with the neuPrint connectome analysis service- 1.1.5 environment.yml
Size: 63 MB - Last synced: 17 days ago - Pushed: 10 months ago
btmartin721/ClineHelpR
Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables- 1.2.1 environment.yml
Size: 93.4 MB - Last synced: 7 months ago - Pushed: almost 2 years ago
johsr/gwas-regenie Fork of genepi/nf-gwas
A nextflow pipeline to perform whole genome regression modelling using regenie.- 1.2.1.* environment.yml
Size: 43.4 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
ZhenyanLuo/FindPlantNLRs
- 1.2.1 environment.yml
Size: 361 KB - Last synced: 3 months ago - Pushed: 3 months ago
marrov/keyfi
keyfi is a python package for key feature identification via dimensionality reduction, unsupervised clustering, and feature correlation in high-dimensional datasets- 1.2.1 environment.yml
Size: 127 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago
Keegan-Humphrey/MATHUSLA-Kalman-Algorithm
The most recent iteration of offline tracking and analysis code for the MATHUSLA Collaboration. https://mathusla-experiment.web.cern.ch/- 1.1.5 env/environment.yml
Size: 7.45 MB - Last synced: about 2 months ago - Pushed: 8 months ago
pymonger/downsample-landsat
Example CWL workflow calling a papermilled notebook.- 1.2.1.* environment.yml
Size: 165 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
CMSHZUpsilonPhoton/HZUpsilonPhotonRun2NanoAOD
H/Z --> Upsilon + Photon - Run2 NanoAOD- 1.1.5.* environment.yml
Size: 8.56 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
csc-training/csc-env-eff
CSC Computing Environment training materials- 1.2.1 data/environment.yml
Size: 14.2 MB - Last synced: 3 minutes ago - Pushed: about 5 hours ago
casrssk/WGS-analysis-in-C_trachomatis
- 1.2.0 mac/samples/envs/environment.yml
Size: 7.39 MB - Last synced: 4 months ago - Pushed: about 2 years ago
EpiDiverse/wgbs
The EpiDiverse Whole Genome Bisulfite Sequencing Pipeline, implemented with Nextflow- 1.1.5.* env/environment.yml
Size: 31.4 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
russHyde/russ-hyde
Public content for my blog- 1.2.1.* conda/environment.yaml
Size: 5.17 MB - Last synced: about 1 year ago - Pushed: about 3 years ago
iuni-cadre/WoS-disambiguation
Project to compare and develop disambiguation solutions for Web fo Science and beyond- 1.1.5 environment.yml
Size: 2.74 MB - Last synced: 19 days ago - Pushed: about 3 years ago
OSU-BMBL/PGRP-Grape-Grafting
Adapting Perennial Crops for Climate Change: Graft Transmissible Effects of Rootstocks on Grapevine Shoots- 1.1.5 environment.yml
Size: 2.22 MB - Last synced: 10 days ago - Pushed: about 3 years ago
CarolinaPB/polish-assembly-shortreads
Polish assembly with short reads- 1.1.5 environment.yml
Size: 35.2 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
Dylkln/Projet_AIOI
- 1.1.5 environment.yml
Size: 197 MB - Last synced: 7 months ago - Pushed: over 3 years ago
jplzhan/maap-ci-stage-io
A bootstrapping repository for running the stage-in and stage-out steps for MAAP CI/CD build.- 1.2.1.* environment.yml
Size: 172 KB - Last synced: 19 days ago - Pushed: over 1 year ago
aleksha/prm
A joint project (PRES and AMBER) for proton radius measurement- 1.1.5 external/environment.yml
Size: 133 KB - Last synced: about 1 year ago - Pushed: about 3 years ago
vaqm2/custom_gwas
Python Code using CyVCF2 to run custom GWAS models on imputed VCF files- 1.2.1.* environment.yml
Size: 958 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago
edotau/fishingcluster
- 1.2.1 workflows/atacseq/environment.yml
Size: 3.74 MB - Last synced: about 1 year ago - Pushed: almost 3 years ago
phylo42/PEWO
Phylogenetic Placement Evaluation Workflows : Benchmark placement software and different reference trees- 1.1.5 envs/environment.yaml
Size: 7.82 MB - Last synced: 2 months ago - Pushed: 8 months ago
web-mev/mev-edgeR
Implementation of Bioconductor's edgeR for basic differential gene expression analysis- 1.2.1 docker/environment.yml
Size: 18.6 KB - Last synced: 10 days ago - Pushed: 3 months ago
nlm-irp-jianglab/Evolink
:palm_tree: A Phylogenetic Approach for Rapid Identification of Genotype-Phenotype Associations in Large-scale Microbial Multi-species Data- 1.2.1 environment.yml
Size: 251 MB - Last synced: 9 months ago - Pushed: 9 months ago
dvishal485/machine-learning-model
Understand how a machine learning model works and it's technical terminology- 1.2.1 environment.yml
Size: 10.2 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
manutamminen/epicpcr_6
- 1.2.1 env/environment.yml
Size: 8.84 MB - Last synced: about 1 year ago - Pushed: over 2 years ago
happykhan/journal
Citation lists- 1.2.1 environment.yml
Size: 28 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
EpiDiverse/snp
The EpiDiverse Bisulfite SNP-Calling and Methylation Clustering Pipeline, implemented with Nextflow- 1.1.5.* env/environment.yml
Size: 600 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago
CSCfi/csc-env-eff π¦
Tutorial and exercise material for using the CSC environment efficiently- 1.2.1 data/environment.yml
Size: 4.39 MB - Last synced: 9 months ago - Pushed: about 3 years ago
nimish15shah/DAG_Processor
A DAG processor and compiler for a tree-based spatial datapath.- 1.2.1 environment.yml
Size: 3.74 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
yangmqglobe/dapipe
θͺε¨εη ATAC-Seq εζζ΅η¨- 1.2.1.* environment.yml
Size: 193 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
TTTPOB/fastq-downloader
download fastq from gsm or srx accession, rename, combine, in one click- 1.2.1 environment.yaml
Size: 93.8 KB - Last synced: 15 days ago - Pushed: almost 2 years ago
therealniklasmoser/physics_guided_nn
- 1.2.1 environment.yml
Size: 99.1 MB - Last synced: 3 months ago - Pushed: 4 months ago
Dylkln/LAGOON
- 1.2.1 environment.yml
Size: 181 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
Laurajmoreno/ML_and_CRO
AplicaciΓ³n de un modelo de Machine Learning a la estrategia CRO de un e-commerce.- 1.2.1 environment.yml
Size: 36.8 MB - Last synced: 12 months ago - Pushed: almost 3 years ago
sadamov/pollenmaps
Creating some nice maps in R- 1.2.1 environment.yml
Size: 79.6 MB - Last synced: about 1 year ago - Pushed: over 2 years ago
bokulich-lab/advanced-comp-bio-tutorial
Hands-on demonstration of 16S rRNA gene sequence analysis for SysBio Advanced Block Course 2022- 1.2.1 environment.yml
Size: 77.9 MB - Last synced: 11 months ago - Pushed: 11 months ago
Colorado-State-University-CMB/Intro-to-qCMB-2022
Class work for Intro to qCMB- 1.2.1 R_on_Summit/environment.yml
Size: 31.4 MB - Last synced: about 2 months ago - Pushed: over 1 year ago
bryancole/raypier_optics
A raytracing toolkit for optical design- 1.2.1 environment.yml
Size: 15.1 MB - Last synced: 5 days ago - Pushed: over 1 year ago
SERVIR/mekong-swat-django
- 1.2.1 environment.yml
Size: 1.58 MB - Last synced: about 1 month ago - Pushed: over 1 year ago
sadamov/phenology_curve_fitting
Fitting of phenological season description curves to historical pollen measurements.- 1.2.1 environment.yml
Size: 53.1 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
ebruun/apc523_project
APC523 - Numerical Methods course project- 1.2.1 environment.yml
Size: 33.2 MB - Last synced: 12 days ago - Pushed: over 2 years ago
russHyde/code_as_data
Analysis of code in R dev packages (for a planned talk)- 1.2.1.* conda/environment.yml
Size: 295 KB - Last synced: 2 months ago - Pushed: 7 months ago
jiangweiyao/RefNAAP
Reference based Nanopore assembly analysis pipeline- 1.2.1.* environment.yml
Size: 76.4 MB - Last synced: 19 days ago - Pushed: about 3 years ago
sadamov/CHAPo
Automatic Pollen Project in Switzerland - Implementation of Real-Time Data into Prognistic Model COSMO- 1.2.1 environment.yml
Size: 51.5 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
hhsecond/coviddatastore
Covid19 dataset and annotations- 1.1.5 docker/executors/lost-cv/environment.yml
Size: 34.6 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
ctlab/GScour
Genome-wide detection of positive selection- 1.1.5 environment.yml
Size: 1.89 MB - Last synced: 18 days ago - Pushed: 11 months ago
russHyde/mast-shiny
Notes / code from working through "Mastering Shiny". Written while running a R4DS bookclub- 1.2.1.* conda/environment.yml
Size: 154 KB - Last synced: about 1 year ago - Pushed: almost 3 years ago
alphagov/govuk-entity-personalisation π¦
Using entities from NER on GOV.UK content to power personalisation.- 1.1.5 environment.yml
Size: 1.07 MB - Last synced: 25 days ago - Pushed: over 2 years ago
wrightdw/COG-UK-ME
COG-UK Mutation Explorer- 1.2.1 environment.yml
Size: 105 MB - Last synced: 3 months ago - Pushed: 3 months ago
rwanwork/sam2irs
sam2irs is a program for calculating intron retention scores (IRS') using input in the sequence alignment/map (SAM) format.- 1.1.5 environment.yml
Size: 155 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago
kevinpryan/caf-subtype-analysis
- 1.2.1 environment.yml
Size: 56.9 MB - Last synced: 8 months ago - Pushed: 8 months ago
ilmonteux/logohunter
Deep learning tool to find brand logos in everyday pictures- 1.1.5 environment.yml
Size: 37.1 MB - Last synced: 26 days ago - Pushed: about 2 years ago
wiltbemj/SWSS-MagStructureLab
Materials for the Space Weather Summer School Lab on Exploring the Structure of the Magnetosphere- 1.2.1 environment.yml
Size: 16.7 MB - Last synced: about 1 year ago - Pushed: almost 2 years ago
mr-eyes/denovo-rnaseq
De novo assembly, Differential gene expression, and annotation workflow- 1.2.1 environment.yml
Size: 1.79 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
pymonger/downsample-dem
Example CWL workflow calling a papermilled notebook that downsamples a Copernicus DEM.- 1.2.1.* environment.yml
Size: 20.5 KB - Last synced: about 1 year ago - Pushed: almost 2 years ago
muhmdrdho/testforgimli
- 1.2.1 environment.yml
Size: 72.3 KB - Last synced: 4 months ago - Pushed: over 1 year ago
ATpoint/atac_chip_preprocess
Preprocessing workflow for ATAC-seq and ChIP-seq data- 1.2.1.* environment.yml
Size: 613 KB - Last synced: 10 months ago - Pushed: 10 months ago
scilifelab-lts/b_henriques-normark_1606
- 1.1.5 envs/environment.yaml
Size: 30.6 MB - Last synced: over 1 year ago
gonzalosm98/scRNA-SeqAnalysis
- 1.1.5 environment.yml
Size: 62.5 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
NatPombubpa/Qiime2_2022.8_binder
Qiime2_2022.8_binder test- 1.2.1.* environment.yml
Size: 10.7 KB - Last synced: 9 months ago - Pushed: over 1 year ago
jana_ebler/genotyping-experiments
- 1.1.5 env/environment.yml
Size: 22.7 MB - Last synced: over 1 year ago
jbloomlab/SARSr-CoV_homolog_survey
Survey of ACE2 binding specificities among SARS-related CoV homologs- 1.1.5 environment.yml
Size: 139 MB - Last synced: 9 months ago - Pushed: about 1 year ago
cjc77/Fogg-Lab-RNA-Seq-analysis
Preliminary analysis and informatics for TCGA gynecological cancer data- 1.2.1.* environment.yml
Size: 61.3 MB - Last synced: 3 months ago - Pushed: over 1 year ago
geneflow/conda/nanopore-amplicon-dereplication
Conda environment for Nanopore Amplicon Dereplication workflow- 1.2.0 environment.yml
Last synced: over 1 year ago
guiterguy219/annotator
Fork of Lost Image Annotator repo- 1.1.5 docker/executors/lost-cv/environment.yml
Last synced: over 1 year ago
milothepsychic/rnaseq_pipeline
Snakemake RNAseq processing pipeline (STAR or Salmon) via a SLURM cluster- 1.1.5 environment.yml
Last synced: over 1 year ago
j-degroot/ACMDD
- 1.2.1 P10_Docking/environment.yml
Size: 68 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
EpiDiverse/dmr
The EpiDiverse Differentially Methylated Regions Pipeline, implemented with Nextflow- 1.1.5.* env/environment.yml
Size: 1.41 MB - Last synced: about 1 year ago - Pushed: over 2 years ago
nshadskiy/TauFakeFactors
Implementation of FakeFactor calculation with pyROOT.- 1.1.5 environment.yaml
Size: 221 KB - Last synced: 6 months ago - Pushed: 7 months ago
shirtsgroup/cg_openmm
Tools to build coarse grained models and perform simulations with OpenMM- 1.2.0 environment.yml
Size: 395 MB - Last synced: about 1 month ago - Pushed: over 1 year ago
dispink/WASA_faciesXRF
- 1.1.5 environment.yml
Size: 14.2 MB - Last synced: 8 months ago - Pushed: over 1 year ago
simonthor/detector-sim
Learning to use Geant4 for the course "Experimental techniques in nuclear and particle physics". Also includes the project- 1.2.1 environment.yml
Size: 3.98 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
tarashakhurana/emergent-occ-forecasting
Implementation of the ECCV '22 paper, "Differentiable Raycasting for Self-supervised Occupancy Forecasting"- 1.2.0 environment.yml
Size: 13.9 MB - Last synced: 20 days ago - Pushed: over 1 year ago
krakchris/rimbun.io
Monitoring urban wilderness at scale- 1.2.0 01_Collect_imagery/environment.yml
Size: 110 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
matosjr/ammd-siamesas
RE-Identification of Person With Siamese Nets- 1.1.5 environment.yml
Size: 12.2 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
jramapuram/BYOL
Bootstrap Your Own Latent (BYOL) pytorch implementation using DistributedDataParallel.- 1.2.0 environment.yml
Size: 88.9 KB - Last synced: 3 days ago - Pushed: over 1 year ago
AlessandroMessori/Football-Scraper
- 1.1.5 environment.yml
Size: 47.9 KB - Last synced: about 1 year ago - Pushed: over 1 year ago
shalevy1/lost Fork of l3p-cv/lost
Label Objects and Save Time (LOST) - Design your own smart Image Annotation process in a web-based environment.- 1.1.5 docker/executors/lost-cv/environment.yml
Size: 36.6 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
RacimoLab/simGL
Simulate genotype likelihoods from tree sequence data- 1.2.1 notebook/environment.yml
Size: 2.19 MB - Last synced: 10 months ago - Pushed: over 1 year ago
numediart/Attention-EEG
- 1.2.0 environment.yml
Size: 204 MB - Last synced: about 1 month ago - Pushed: over 1 year ago
RohanChacko/IBM-Hack-2019
Topic: Energy Audit for households | Video: https://youtu.be/ThVLGzs0m5c- 1.1.5 energy-auditor/environment.yml
Size: 10 MB - Last synced: 12 months ago - Pushed: over 1 year ago
dieterich-lab/ImmunOMICS
- 1.2.1 environment.yml
Size: 27.6 MB - Last synced: about 2 months ago - Pushed: 12 months ago
computational-chemical-biology/cis_reg
- 1.2.1 environment.yml
Size: 16.2 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
nganltp/admicro-LaSO
- 1.1.5 environment.yml
Size: 1.71 MB - Last synced: about 1 year ago - Pushed: over 1 year ago
pharmbio/CP-Chem-MoA
- 1.2.1 environment.yml
Size: 4.33 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
fjclark/ani_mmml_corrections
Scripts for carrying out mm->ml corrections with ANI- 1.2.1 environment.yml
Size: 4.92 MB - Last synced: about 1 year ago - Pushed: about 1 year ago
jbloomlab/barcoded_flu_pdmH1N1
Barcoded pdmH1N1 virus hashing experiment- 1.1.5 environment.yml
Size: 642 MB - Last synced: 3 months ago - Pushed: 9 months ago
gagneurlab/transmicron
- 1.2.1.* environment.yml
Size: 16.7 MB - Last synced: 2 days ago - Pushed: over 1 year ago
clemente-lab/mmeds-meta
A database for storing and analyzing omics data- 1.2.1 docs/environment.yml
Size: 890 MB - Last synced: about 1 month ago - Pushed: 3 months ago
samwitham/PromoterArchitecture
Arabidopsis thaliana promoter architecture analysis pipeline- 1.1.5 environment.yml
Size: 187 MB - Last synced: 7 months ago - Pushed: 9 months ago
vsitzmann/siren
Official implementation of "Implicit Neural Representations with Periodic Activation Functions"- 1.1.5 environment.yml
Size: 2.13 MB - Last synced: 6 months ago - Pushed: over 1 year ago
SteMIDIfactory/P-DOR
Quick and easy outbreak reconstruction pipeline- 1.2.1 environment.yml
Size: 37.7 MB - Last synced: 2 months ago - Pushed: 7 months ago
oscarlr/IGenotyper
- 1.2.0 environment.yml
Size: 10.2 MB - Last synced: 3 months ago - Pushed: 3 months ago
christophfink/r5py Fork of r5py/r5py
A Python wrapper for the R5 routing analysis engine (https://github.com/conveyal/r5). Inspired by r5r, a wrapper for R (https://ipeagit.github.io/r5r/)- 1.3.0.* .binder/environment.yml
Size: 39.5 MB - Last synced: 19 days ago - Pushed: 2 months ago