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GitHub / web-mev / mev-edgeR
Implementation of Bioconductor's edgeR for basic differential gene expression analysis
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/web-mev%2Fmev-edgeR
Stars: 0
Forks: 0
Open Issues: 0
License: None
Language: R
Repo Size: 18.6 KB
Dependencies:
95
Created: over 3 years ago
Updated: about 2 years ago
Last pushed: 4 months ago
Last synced: 28 days ago
Files
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Readme
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Dependencies
docker/environment.yml
conda
- _libgcc_mutex 0.1
- _openmp_mutex 4.5
- _r-mutex 1.0.1
- binutils_impl_linux-64 2.35.1
- binutils_linux-64 2.35
- bioconductor-edger 3.32.0
- bioconductor-limma 3.46.0
- bwidget 1.9.14
- bzip2 1.0.8
- c-ares 1.17.1
- ca-certificates 2020.12.5
- cairo 1.16.0
- curl 7.71.1
- fontconfig 2.13.1
- freetype 2.10.4
- fribidi 1.0.10
- gcc_impl_linux-64 9.3.0
- gcc_linux-64 9.3.0
- gettext 0.19.8.1
- gfortran_impl_linux-64 9.3.0
- gfortran_linux-64 9.3.0
- graphite2 1.3.13
- gsl 2.6
- gxx_impl_linux-64 9.3.0
- gxx_linux-64 9.3.0
- harfbuzz 2.7.4
- icu 68.1
- jpeg 9d
- kernel-headers_linux-64 2.6.32
- krb5 1.17.2
- ld_impl_linux-64 2.35.1
- libblas 3.9.0
- libcblas 3.9.0
- libcurl 7.71.1
- libedit 3.1.20191231
- libev 4.33
- libffi 3.3
- libgcc-devel_linux-64 9.3.0
- libgcc-ng 9.3.0
- libgfortran-ng 9.3.0
- libgfortran5 9.3.0
- libglib 2.66.4
- libgomp 9.3.0
- libiconv 1.16
- liblapack 3.9.0
- libnghttp2 1.41.0
- libopenblas 0.3.12
- libpng 1.6.37
- libssh2 1.9.0
- libstdcxx-devel_linux-64 9.3.0
- libstdcxx-ng 9.3.0
- libtiff 4.2.0
- libuuid 2.32.1
- libwebp-base 1.1.0
- libxcb 1.13
- libxml2 2.9.10
- lz4-c 1.9.3
- make 4.3
- ncurses 6.2
- openssl 1.1.1i
- pango 1.42.4
- pcre 8.44
- pcre2 10.36
- pixman 0.40.0
- pthread-stubs 0.4
- r-base 4.0.3
- r-lattice 0.20_41
- r-locfit 1.5_9.4
- r-rcpp 1.0.6
- readline 8.0
- sed 4.8
- sysroot_linux-64 2.12
- tk 8.6.10
- tktable 2.10
- xorg-kbproto 1.0.7
- xorg-libice 1.0.10
- xorg-libsm 1.2.3
- xorg-libx11 1.6.12
- xorg-libxau 1.0.9
- xorg-libxdmcp 1.1.3
- xorg-libxext 1.3.4
- xorg-libxrender 0.9.10
- xorg-libxt 1.2.1
- xorg-renderproto 0.11.1
- xorg-xextproto 7.3.0
- xorg-xproto 7.0.31
- xz 5.2.5
- zlib 1.2.11
- zstd 1.4.8
- actions/checkout v2 composite
- docker/build-push-action v2.9.0 composite
- docker/login-action v1.14.1 composite
- docker/metadata-action v3.6.2 composite
- docker/setup-buildx-action v1.6.0 composite
docker/Dockerfile
docker
- debian stretch build