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GitHub / arun-sub / genomicsbench
A benchmark suite to study the performance characteristics of genomics applications
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/arun-sub%2Fgenomicsbench
Stars: 27
Forks: 5
Open Issues: 2
License: None
Language: C
Repo Size: 39.5 MB
Dependencies:
10
Created: about 4 years ago
Updated: 12 months ago
Last pushed: 11 months ago
Last synced: 10 months ago
Topics: benchmark-suite, genomics, performance-analysis
Files
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Readme
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Dependencies
requirements.txt
pypi
- bonito-cuda-runtime ==0.0.2a2
- fast-ctc-decode ==0.2.5
- ont-fast5-api ==3.1.6
- parasail ==1.2
- requests ==2.22.0
- scipy ==1.5.2
- tensorflow-gpu ==1.13.2
- toml ==0.10.0
- torch ==1.4.0
- tqdm ==4.31.1