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GitHub / bioinform / varsim
VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/bioinform%2Fvarsim
Stars: 79
Forks: 30
Open Issues: 39
License: bsd-2-clause
Language: Java
Repo Size: 45.6 MB
Dependencies:
13
Created: about 10 years ago
Updated: 5 months ago
Last pushed: about 1 year ago
Last synced: 2 months ago
Topics: genomics, high-throughput-sequencing, simulation, validation
Files
Dependencies
- args4j:args4j 2.33
- com.fasterxml.jackson.core:jackson-databind 2.9.10.4
- com.github.samtools:htsjdk 2.14.3
- com.google.guava:guava 17.0
- commons-codec:commons-codec 1.10
- commons-io:commons-io 2.4
- log4j:log4j 1.2.17
- org.apache.commons:commons-io 1.3.2
- org.apache.commons:commons-lang3 3.3.1
- org.apache.commons:commons-math3 3.6.1
- org.jgrapht:jgrapht-core 1.0.1
- junit:junit 4.13.1 test
- centos 7.2.1511 build