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GitHub / cantinilab / HuMMuS

Molecular interactions inference from single-cell multi-omics data

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cantinilab%2FHuMMuS

Stars: 13
Forks: 3
Open Issues: 3

License: agpl-3.0
Language: Python
Repo Size: 78.4 MB
Dependencies: 31

Created: over 1 year ago
Updated: 23 days ago
Last pushed: 23 days ago
Last synced: 23 days ago

Topics: biological-networks, epigenomics, multi-omics, multilayer-networks, single-cell, transcriptomics

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Dependencies

.github/workflows/pkgdown.yaml actions

JamesIves/github-pages-deploy-action v4.4.1 composite
actions/checkout v3 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

DESCRIPTION cran

R >= 4.0.0 depends
GENIE3 * imports
IRanges * imports
JASPAR2020 * imports
Matrix * imports
OmnipathR * imports
S4Vectors * imports
Signac * imports
SingleCellExperiment * imports
TFBSTools * imports
biovizBase * imports
chromVAR * imports
grr * imports
motifmatchr * imports
reshape2 * imports
reticulate * imports
sparseMatrixStats * imports
stringr * imports
tidyr * imports
utils * imports
BSgenome.Hsapiens.UCSC.hg38 * suggests
EnsDb.Hsapiens.v86 * suggests
doParallel * suggests
doRNG * suggests
knitr * suggests
rmarkdown * suggests