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GitHub / comprna / radian
Nanopore direct RNA basecaller
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/comprna%2Fradian
Stars: 6
Forks: 2
Open Issues: 1
License: gpl-3.0
Language: Python
Repo Size: 70.9 MB
Dependencies:
11
Created: over 3 years ago
Updated: over 1 year ago
Last pushed: over 1 year ago
Last synced: about 1 year ago
Topics: basecalling, deep-learning, language-model, nanopore, rna
Files
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Readme
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Dependencies
requirements.txt
pypi
- PyYAML *
- attrdict *
- biopython *
- keras-tcn *
- matplotlib *
- numpy *
- ont-fast5-api *
- pysam *
- scikit-learn *
- tensorflow *
- textdistance *