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GitHub / cov-lineages / hedgehog
Spikey SARS-CoV-2 sequence based lineage set assignment
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cov-lineages%2Fhedgehog
Stars: 4
Forks: 3
Open Issues: 1
License: gpl-3.0
Language: Python
Repo Size: 98.4 MB
Dependencies:
14
Created: almost 3 years ago
Updated: 9 days ago
Last pushed: 9 days ago
Last synced: 9 days ago
Files
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Readme
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Dependencies
setup.py
pypi
.github/workflows/hedgehog.yml
actions
- actions/checkout v2 composite
- conda-incubator/setup-miniconda v2 composite
environment.yml
conda
- mafft
- minimap2 >=2.16
- pip
- python >=3.7
- snakemake-minimal 7.24.0.*