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GitHub / dalmolingroup / bulkrna

Dalmolin Group's workflow for pre-processing, alignment and quantification of bulk RNA-seq data

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dalmolingroup%2Fbulkrna

Stars: 5
Forks: 0
Open Issues: 0

License: mit
Language: Groovy
Repo Size: 2.29 MB
Dependencies: 14

Created: over 1 year ago
Updated: 12 months ago
Last pushed: 12 months ago
Last synced: 12 months ago

Topics: bioinformatics, bulk-rna-seq, pipeline

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Dependencies

.github/workflows/branch.yml actions

mshick/add-pr-comment v1 composite

.github/workflows/ci.yml actions

actions/checkout v2 composite
nf-core/setup-nextflow v1 composite

.github/workflows/fix-linting.yml actions

actions/checkout v3 composite
actions/setup-node v2 composite

.github/workflows/linting.yml actions

actions/checkout v2 composite
actions/setup-node v2 composite
actions/setup-python v3 composite
actions/upload-artifact v2 composite
mshick/add-pr-comment v1 composite
nf-core/setup-nextflow v1 composite
psf/black stable composite

.github/workflows/linting_comment.yml actions

dawidd6/action-download-artifact v2 composite
marocchino/sticky-pull-request-comment v2 composite