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GitHub / dimitrisokolowskei / rnaseq_snakemake
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dimitrisokolowskei%2Frnaseq_snakemake
Stars: 0
Forks: 0
Open Issues: 0
License: mit
Language: R
Repo Size: 113 MB
Dependencies:
97
Created: over 2 years ago
Updated: about 2 years ago
Last pushed: almost 2 years ago
Last synced: about 1 year ago
Files
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Dependencies
environment.yaml
conda
- _libgcc_mutex 0.1
- _openmp_mutex 4.5
- bcrypt 3.2.0
- blas 1.0
- brotlipy 0.7.0
- ca-certificates 2021.10.8
- certifi 2021.5.30
- cffi 1.14.6
- charset-normalizer 2.0.4
- cryptography 35.0.0
- dbus 1.13.18
- docutils 0.17.1
- dropbox 11.14.0
- expat 2.4.4
- fastp 0.20.1
- fastqc 0.11.9
- filechunkio 1.6
- font-ttf-dejavu-sans-mono 2.37
- fontconfig 2.13.1
- freetype 2.11.0
- ftputil 3.2
- glib 2.69.1
- hdf5 1.10.6
- icu 58.2
- idna 3.3
- kallisto 0.46.2
- ld_impl_linux-64 2.35.1
- libffi 3.3
- libgcc-ng 9.3.0
- libgfortran-ng 7.5.0
- libgfortran4 7.5.0
- libgomp 9.3.0
- libiconv 1.15
- libopenblas 0.3.18
- libpng 1.6.37
- libsodium 1.0.18
- libstdcxx-ng 9.3.0
- libuuid 1.0.3
- libxcb 1.14
- libxml2 2.9.12
- ncbi-ngs-sdk 2.10.4
- ncurses 6.3
- numpy 1.19.2
- numpy-base 1.19.2
- openjdk 11.0.13
- openssl 1.1.1n
- pandas 1.1.5
- parallel 20220222
- paramiko 2.8.1
- pcre 8.45
- perl 5.26.2
- perl-app-cpanminus 1.7044
- perl-business-isbn 3.004
- perl-business-isbn-data 20140910.003
- perl-carp 1.38
- perl-constant 1.33
- perl-data-dumper 2.173
- perl-encode 2.88
- perl-exporter 5.72
- perl-extutils-makemaker 7.36
- perl-file-path 2.16
- perl-file-temp 0.2304
- perl-mime-base64 3.15
- perl-parent 0.236
- perl-uri 1.76
- perl-xml-libxml 2.0132
- perl-xml-namespacesupport 1.12
- perl-xml-sax 1.02
- perl-xml-sax-base 1.09
- perl-xsloader 0.24
- pip 21.2.2
- ply 3.11
- psutil 5.8.0
- pycparser 2.21
- pynacl 1.4.0
- pyopenssl 22.0.0
- pysftp 0.2.9
- pysocks 1.7.1
- python 3.6.13
- python-dateutil 2.8.2
- pytz 2021.3
- pyyaml 5.4.1
- readline 8.1.2
- requests 2.27.1
- setuptools 58.0.4
- six 1.16.0
- snakemake 3.13.3
- sqlite 3.38.2
- sra-tools 2.10.0
- stone 3.2.1
- tk 8.6.11
- urllib3 1.26.8
- wheel 0.37.1
- wrapt 1.12.1
- xz 5.2.5
- yaml 0.2.5
- zlib 1.2.12