GitHub / dlaehnemann / create-ecdna-testing-data
A Snakemake workflow for creating testing data for ecDNA analysis workflows: long reads (Nanopore with NanoSim) and short reads (Illumina with seqkit and mason).
JSON API: http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dlaehnemann%2Fcreate-ecdna-testing-data
Stars: 0
Forks: 0
Open issues: 2
License: mit
Language: Python
Size: 47.9 KB
Dependencies parsed at: Pending
Created at: 8 months ago
Updated at: 3 months ago
Pushed at: 3 months ago
Last synced at: about 1 month ago
Topics: circular-dna, ecdna, illumina-sequencing, nanopore-reads, simulation, snakemake, workflow
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