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GitHub / dlcgold / bact-project
Data science lab in biosciences project on bacterial infections annotated in KEGG
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dlcgold%2Fbact-project
Stars: 0
Forks: 0
Open Issues: 0
License: None
Language: Python
Repo Size: 1.4 MB
Dependencies:
142
Created: about 2 years ago
Updated: almost 2 years ago
Last pushed: almost 2 years ago
Last synced: 2 months ago
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Dependencies
requirements.txt
pypi
- Jinja2 ==3.1.2
- Keras-Preprocessing ==1.1.2
- Markdown ==3.3.7
- MarkupSafe ==2.1.1
- Pillow ==9.1.1
- Pygments ==2.12.0
- QtPy ==2.1.0
- Send2Trash ==1.8.0
- Werkzeug ==2.1.2
- absl-py ==1.0.0
- argon2-cffi ==21.3.0
- argon2-cffi-bindings ==21.2.0
- asttokens ==2.0.5
- astunparse ==1.6.3
- attrs ==21.4.0
- backcall ==0.2.0
- beautifulsoup4 ==4.11.1
- bio ==1.3.9
- biopython ==1.79
- biothings-client ==0.2.6
- bleach ==5.0.0
- blis ==0.7.7
- bs4 ==0.0.1
- cachetools ==5.1.0
- catalogue ==1.0.0
- certifi ==2022.5.18.1
- cffi ==1.15.0
- charset-normalizer ==2.0.12
- click ==8.1.3
- cycler ==0.11.0
- cymem ==2.0.6
- debugpy ==1.6.0
- decorator ==5.1.1
- defusedxml ==0.7.1
- drugbank-downloader ==0.1.1
- editdistance ==0.6.0
- elasticsearch ==5.4.0
- elasticsearch-dsl ==5.3.0
- entrypoints ==0.4
- executing ==0.8.3
- fastjsonschema ==2.15.3
- flatbuffers ==1.12
- fonttools ==4.33.3
- gast ==0.4.0
- gensim ==4.2.0
- google-auth ==2.6.6
- google-auth-oauthlib ==0.4.6
- google-pasta ==0.2.0
- grpcio ==1.46.3
- h5py ==3.7.0
- idna ==3.3
- importlib-metadata ==4.11.4
- ipykernel ==6.13.0
- ipython ==8.4.0
- ipython-genutils ==0.2.0
- ipywidgets ==7.7.0
- jedi ==0.18.1
- jsonschema ==4.5.1
- jupyter ==1.0.0
- jupyter-client ==7.3.1
- jupyter-console ==6.4.3
- jupyter-core ==4.10.0
- jupyterlab-pygments ==0.2.2
- jupyterlab-widgets ==1.1.0
- keras ==2.9.0
- kiwisolver ==1.4.2
- libclang ==14.0.1
- matplotlib ==3.5.2
- matplotlib-inline ==0.1.3
- mistune ==0.8.4
- mordecai ==2.1.0
- murmurhash ==1.0.7
- mygene ==3.2.2
- nbclient ==0.6.3
- nbconvert ==6.5.0
- nbformat ==5.4.0
- nest-asyncio ==1.5.5
- notebook ==6.4.11
- numpy ==1.22.4
- oauthlib ==3.2.0
- opt-einsum ==3.3.0
- packaging ==21.3
- pandas ==1.4.2
- pandocfilters ==1.5.0
- parso ==0.8.3
- patsy ==0.5.2
- pexpect ==4.8.0
- pickleshare ==0.7.5
- plac ==1.1.3
- plotly ==5.8.0
- plotly-express ==0.4.1
- preshed ==3.0.6
- prometheus-client ==0.14.1
- prompt-toolkit ==3.0.29
- protobuf ==3.19.4
- psutil ==5.9.1
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyasn1 ==0.4.8
- pyasn1-modules ==0.2.8
- pycparser ==2.21
- pyparsing ==3.0.9
- pyrsistent ==0.18.1
- pystow ==0.4.3
- python-dateutil ==2.8.2
- pytz ==2022.1
- pyzmq ==23.0.0
- qtconsole ==5.3.0
- requests ==2.27.1
- requests-oauthlib ==1.3.1
- rsa ==4.8
- scipy ==1.8.1
- six ==1.16.0
- smart-open ==6.0.0
- soupsieve ==2.3.2.post1
- spacy ==2.3.7
- srsly ==1.0.5
- stack-data ==0.2.0
- statsmodels ==0.13.2
- tenacity ==8.0.1
- tensorboard ==2.9.0
- tensorboard-data-server ==0.6.1
- tensorboard-plugin-wit ==1.8.1
- tensorflow ==2.9.1
- tensorflow-estimator ==2.9.0
- tensorflow-io-gcs-filesystem ==0.26.0
- termcolor ==1.1.0
- terminado ==0.15.0
- thinc ==7.4.5
- tinycss2 ==1.1.1
- tornado ==6.1
- tqdm ==4.64.0
- traitlets ==5.2.1.post0
- typing_extensions ==4.2.0
- urllib3 ==1.26.9
- wasabi ==0.9.1
- wcwidth ==0.2.5
- webencodings ==0.5.1
- widgetsnbextension ==3.6.0
- wordcloud ==1.8.1
- wrapt ==1.14.1
- zipp ==3.8.0