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GitHub / dozmorovlab / UO_project_2021
Shared repo for the UO project
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/dozmorovlab%2FUO_project_2021
Stars: 1
Forks: 0
Open Issues: 0
License: None
Language: HTML
Repo Size: 16.2 MB
Dependencies:
325
Created: over 2 years ago
Updated: 8 months ago
Last pushed: about 2 years ago
Last synced: 8 months ago
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Dependencies
- _libgcc_mutex 0.1
- _openmp_mutex 4.5
- asciitree 0.3.3
- bcftools 1.3.1
- biopython 1.79
- blosc 1.21.0
- bokeh 2.4.0
- bzip2 1.0.8
- c-ares 1.17.2
- ca-certificates 2021.10.8
- cached-property 1.5.2
- cached_property 1.5.2
- certifi 2021.10.8
- click 8.0.2
- cloudpickle 2.0.0
- configparser 5.0.2
- cooler 0.8.6
- curl 7.79.1
- cycler 0.10.0
- cytoolz 0.11.0
- dask 2021.9.1
- dask-core 2021.9.1
- dill 0.3.4
- distributed 2021.9.1
- eigen 3.4.0
- fit_nbinom 1.1
- freetype 2.10.4
- fsspec 2021.10.0
- future 0.18.2
- h5py 3.4.0
- hdf5 1.12.1
- heapdict 1.0.1
- hic2cool 0.8.3
- hicexplorer 3.0.1
- hicmatrix 13
- htslib 1.3.1
- intervaltree 3.0.2
- jbig 2.1
- jinja2 3.0.2
- jpeg 9d
- kiwisolver 1.3.2
- krb5 1.19.2
- krbalancing 0.0.5
- lcms2 2.12
- ld_impl_linux-64 2.36.1
- lerc 2.2.1
- libblas 3.9.0
- libcblas 3.9.0
- libcurl 7.79.1
- libdeflate 1.7
- libedit 3.1.20191231
- libev 4.33
- libffi 3.4.2
- libgcc-ng 11.2.0
- libgfortran-ng 11.2.0
- libgfortran5 11.2.0
- libgomp 11.2.0
- liblapack 3.9.0
- libnghttp2 1.43.0
- libopenblas 0.3.17
- libpng 1.6.37
- libssh2 1.10.0
- libstdcxx-ng 11.2.0
- libtiff 4.3.0
- libwebp-base 1.2.1
- libzlib 1.2.11
- locket 0.2.0
- lz4-c 1.9.3
- lzo 2.10
- markupsafe 2.0.1
- matplotlib 3.3.2
- matplotlib-base 3.3.2
- mock 4.0.3
- msgpack-python 1.0.2
- multiprocess 0.70.12.2
- ncurses 6.2
- numexpr 2.7.3
- numpy 1.21.2
- olefile 0.46
- openjpeg 2.4.0
- openssl 3.0.0
- packaging 21.0
- pairix 0.3.7
- pandas 1.3.3
- partd 1.2.0
- pillow 8.3.2
- pip 21.2.4
- psutil 5.8.0
- pybigwig 0.3.18
- pybind11 2.8.0
- pybind11-global 2.8.0
- pyfaidx 0.6.2
- pygenometracks 3.0
- pyparsing 2.4.7
- pysam 0.9.1
- pytables 3.6.1
- python 3.9.7
- python-dateutil 2.8.2
- python_abi 3.9
- pytz 2021.3
- pyyaml 5.4.1
- readline 8.1
- samtools 1.3.1
- scipy 1.7.1
- setuptools 58.2.0
- six 1.16.0
- sortedcontainers 2.4.0
- sqlite 3.36.0
- tblib 1.7.0
- tk 8.6.11
- toolz 0.11.1
- tornado 6.1
- typing_extensions 3.10.0.2
- tzdata 2021c
- unidecode 1.3.2
- wheel 0.37.0
- xz 5.2.5
- yaml 0.2.5
- zict 2.0.0
- zlib 1.2.11
- zstd 1.5.0
- _libgcc_mutex 0.1
- _openmp_mutex 4.5
- asciitree 0.3.3
- bcftools 1.3.1
- biopython 1.79
- blosc 1.21.0
- bokeh 2.4.0
- bzip2 1.0.8
- c-ares 1.17.2
- ca-certificates 2021.10.8
- cached-property 1.5.2
- cached_property 1.5.2
- certifi 2021.10.8
- click 8.0.2
- cloudpickle 2.0.0
- configparser 5.0.2
- cooler 0.8.6
- curl 7.79.1
- cycler 0.10.0
- cytoolz 0.11.0
- dask 2021.9.1
- dask-core 2021.9.1
- dill 0.3.4
- distributed 2021.9.1
- eigen 3.4.0
- fit_nbinom 1.1
- freetype 2.10.4
- fsspec 2021.10.0
- future 0.18.2
- h5py 3.4.0
- hdf5 1.12.1
- heapdict 1.0.1
- hic2cool 0.8.3
- hicexplorer 3.0.1
- hicmatrix 13
- htslib 1.3.1
- intervaltree 3.0.2
- java-jdk 8.45.14
- jbig 2.1
- jinja2 3.0.2
- jpeg 9d
- kiwisolver 1.3.2
- krb5 1.19.2
- krbalancing 0.0.5
- lcms2 2.12
- ld_impl_linux-64 2.36.1
- lerc 2.2.1
- libblas 3.9.0
- libcblas 3.9.0
- libcurl 7.79.1
- libdeflate 1.7
- libedit 3.1.20191231
- libev 4.33
- libffi 3.4.2
- libgcc-ng 11.2.0
- libgfortran-ng 11.2.0
- libgfortran5 11.2.0
- libgomp 11.2.0
- liblapack 3.9.0
- libnghttp2 1.43.0
- libopenblas 0.3.17
- libpng 1.6.37
- libssh2 1.10.0
- libstdcxx-ng 11.2.0
- libtiff 4.3.0
- libwebp-base 1.2.1
- libzlib 1.2.11
- locket 0.2.0
- lz4-c 1.9.3
- lzo 2.10
- markupsafe 2.0.1
- matplotlib 3.3.2
- matplotlib-base 3.3.2
- mock 4.0.3
- msgpack-python 1.0.2
- multiprocess 0.70.12.2
- ncurses 6.2
- numexpr 2.7.3
- numpy 1.21.2
- olefile 0.46
- openjpeg 2.4.0
- openssl 3.0.0
- packaging 21.0
- pairix 0.3.7
- pandas 1.3.3
- partd 1.2.0
- pillow 8.3.2
- pip 21.2.4
- psutil 5.8.0
- pybigwig 0.3.18
- pybind11 2.8.0
- pybind11-global 2.8.0
- pyfaidx 0.6.2
- pygenometracks 3.0
- pyparsing 2.4.7
- pysam 0.9.1
- pytables 3.6.1
- python 3.9.7
- python-dateutil 2.8.2
- python_abi 3.9
- pytz 2021.3
- pyyaml 5.4.1
- readline 8.1
- samtools 1.3.1
- scipy 1.7.1
- setuptools 58.2.0
- six 1.16.0
- sortedcontainers 2.4.0
- sqlite 3.36.0
- tblib 1.7.0
- tk 8.6.11
- toolz 0.11.1
- tornado 6.1
- typing_extensions 3.10.0.2
- tzdata 2021c
- unidecode 1.3.2
- wheel 0.37.0
- xz 5.2.5
- yaml 0.2.5
- zict 2.0.0
- zlib 1.2.11
- zstd 1.5.0
- Pillow ==8.3.2
- PyWavelets ==1.1.1
- PyYAML ==5.4.1
- asciitree ==0.3.3
- attrs ==21.2.0
- biopython ==1.79
- click ==8.0.2
- cloudpickle ==2.0.0
- cooler ==0.8.11
- cycler ==0.10.0
- cytoolz ==0.10.1
- dill ==0.3.4
- drmaa ==0.7.9
- fanc ==0.9.21
- future ==0.18.2
- genomic-regions ==0.0.10
- gridmap ==0.15.0
- h5py ==3.4.0
- imageio ==2.9.0
- iniconfig ==1.1.1
- intervaltree ==3.1.0
- joblib ==1.1.0
- kiwisolver ==1.3.2
- matplotlib ==3.4.3
- msgpack ==1.0.2
- msgpack-numpy ==0.4.7.1
- multiprocess ==0.70.12.2
- networkx ==2.6.3
- numexpr ==2.7.3
- numpy ==1.21.2
- packaging ==21.0
- pandas ==1.3.3
- pluggy ==1.0.0
- progressbar2 ==3.53.3
- psutil ==5.8.0
- py ==1.10.0
- pyBigWig ==0.3.18
- pybedtools ==0.8.2
- pyfaidx ==0.6.2
- pypairix ==0.3.7
- pyparsing ==2.4.7
- pysam ==0.17.0
- pytest ==6.2.5
- python-dateutil ==2.8.2
- python-utils ==2.5.6
- pytz ==2021.3
- pyzmq ==22.3.0
- scikit-image ==0.18.3
- scikit-learn ==1.0
- scipy ==1.7.1
- seaborn ==0.11.2
- simplejson ==3.17.5
- six ==1.16.0
- sortedcontainers ==2.4.0
- tables ==3.6.1
- threadpoolctl ==3.0.0
- tifffile ==2021.10.10
- toml ==0.10.2
- toolz ==0.11.1
- cachetools ==4.2.4
- certifi ==2021.10.8
- charset-normalizer ==2.0.7
- click ==8.0.3
- google-api-core ==2.1.1
- google-api-python-client ==2.26.1
- google-auth ==2.3.0
- google-auth-httplib2 ==0.1.0
- google-auth-oauthlib ==0.4.6
- googleapis-common-protos ==1.53.0
- httplib2 ==0.20.1
- idna ==3.3
- oauthlib ==3.1.1
- protobuf ==3.18.1
- pyasn1 ==0.4.8
- pyasn1-modules ==0.2.8
- pyparsing ==2.4.7
- requests ==2.26.0
- requests-oauthlib ==1.3.0
- rsa ==4.7.2
- six ==1.16.0
- uritemplate ==4.1.1
- urllib3 ==1.26.7