Ecosyste.ms: Repos

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GitHub / ersilia-os / ersilia

The Ersilia Model Hub, a repository of AI/ML models for infectious and neglected disease research.

JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ersilia-os%2Fersilia

Stars: 186
Forks: 119
Open Issues: 68

License: gpl-3.0
Language: Python
Repo Size: 42.3 MB
Dependencies: 68

Created: almost 4 years ago
Updated: about 1 month ago
Last pushed: about 1 month ago
Last synced: about 1 month ago

Commit Stats

Commits: 1351
Authors: 85
Mean commits per author: 15.89
Development Distribution Score: 0.503
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/ersilia-os/ersilia

Topics: drug-discovery, ersilia, machine-learning, model-hub, neglected-tropical-disease, open-source, python

Funding links: https://github.com/sponsors/ersilia-os

Files

Readme

Dependencies

.github/workflows/approve-dispatch.yml actions

GrantBirki/comment eab1bc94aa728cf526dcd6639bfd067512d4a5cb composite
GrantBirki/issue-template-parser v6.1.0 composite
GuillaumeFalourd/clone-github-repo-action 62795acaa4a02f89824de75c7025459a9cabaa45 composite
actions-js/push 156f2b10c3aa000c44dbe75ea7018f32ae999772 composite
actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite
actions/setup-python 61a6322f88396a6271a6ee3565807d608ecaddd1 composite

.github/workflows/approve-trigger.yml actions

peter-evans/slash-command-dispatch a28ee6cd74d5200f99e247ebc7b365c03ae0ef3c composite

.github/workflows/ersilia-base-image-to-dockerhub.yml actions

actions/checkout master composite
docker/build-push-action v4 composite
docker/login-action v2 composite
docker/metadata-action v4 composite
docker/setup-buildx-action v2 composite
docker/setup-qemu-action v2 composite

.github/workflows/ersilia-installer-to-dockerhub.yml actions

actions/checkout master composite
docker/build-push-action v4 composite
docker/login-action v2 composite
docker/metadata-action v4 composite
docker/setup-buildx-action v2 composite
docker/setup-qemu-action v2 composite

.github/workflows/install.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite
actions/setup-python 61a6322f88396a6271a6ee3565807d608ecaddd1 composite

.github/workflows/json-check.yml actions

GrantBirki/json-yaml-validate 1652fde01b1be71dfa7131148819e67639792673 composite
actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite

.github/workflows/pr_check.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite

.github/workflows/predict-model-input.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite

.github/workflows/predict-model.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite

.github/workflows/python-publish.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite
actions/setup-python 61a6322f88396a6271a6ee3565807d608ecaddd1 composite

.github/workflows/quick-manual-model-test.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite
actions/upload-artifact 0b7f8abb1508181956e8e162db84b466c27e18ce composite

.github/workflows/tag-to-version.yml actions

actions-js/push 156f2b10c3aa000c44dbe75ea7018f32ae999772 composite
actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite

.github/workflows/test-colab.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite
actions/upload-artifact 0b7f8abb1508181956e8e162db84b466c27e18ce composite

.github/workflows/test.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite

.github/workflows/update-model-actions-from-eos-template-input.yml actions

de-vri-es/setup-git-credentials v2 composite

.github/workflows/write_secrets.yml actions

actions/checkout f43a0e5ff2bd294095638e18286ca9a3d1956744 composite
dmnemec/copy_file_to_another_repo_action c93037aa10fa8893de271f19978c980d0c1a9b37 composite

.devcontainer/Dockerfile docker

python 3.10 build

dockerfiles/circleci/Dockerfile docker

ubuntu 20.04 build

dockerfiles/easyinstallimage/Dockerfile docker

ubuntu 20.04 build

dockerfiles/installer/Dockerfile docker

ubuntu 20.04 build

dockerfiles/model-deploy/base/Dockerfile docker

python 3.7-slim-buster build

dockerfiles/model-deploy/model/Dockerfile docker

ersiliaos/base latest build

ersilia/hub/fetch/inner_template/Dockerfile docker

bentoml/model-server 0.11.0-py37 build

test/models/eos0t01/Dockerfile docker

bentoml/model-server 0.11.0-slim-py37 build

test/models/eos0t02/Dockerfile docker

bentoml/model-server 0.11.0-slim-py37 build

test/models/eos0t03/Dockerfile docker

bentoml/model-server 0.11.0-py37 build

test/models/eos0t04/Dockerfile docker

bentoml/model-server 0.11.0-slim-py37 build

ersilia/cli/commands/setup.py pypi

ersilia/hub/fetch/actions/setup.py pypi

pyproject.toml pypi

PyYAML ^6.0.1
boto3 ^1.28.40
click ^8.1.7
docker ^6.1.3
dockerfile-parse ^2.0.1
emoji ^2.8.0
fuzzywuzzy ^0.18.0
h5py ^3.7.0
inputimeout ^1.0.4
isaura 0.1
jinja2 ^3.1.2
levenshtein ^0.21.1
loguru ^0.6.0
pyairtable <2
pytest ^7.4.0
python >=3.7
sphinx >=5.3.0
tqdm ^4.66.1
validators --- - !ruby/hash:ActiveSupport::HashWithIndifferentAccess version: 0.20.0 python: 3.7.* - !ruby/hash:ActiveSupport::HashWithIndifferentAccess version: "~0.21.0" python: ">=3.8"

setup.py pypi