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GitHub / faridrashidi / trisicell
Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/faridrashidi%2Ftrisicell
Stars: 10
Forks: 2
Open Issues: 0
License: bsd-3-clause
Language: Python
Repo Size: 155 MB
Dependencies:
54
Created: about 3 years ago
Updated: about 2 months ago
Last pushed: 5 months ago
Last synced: 20 days ago
Commit Stats
Commits: 394
Authors: 2
Mean commits per author: 197.0
Development Distribution Score: 0.028
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/faridrashidi/trisicell
Topics: algorithms, bioinformatics, cancer, evolution, phylogenetics, single-cell
Files
Dependencies
- memory_profiler >=0.57.0
- nbsphinx >=0.8.6,<0.8.7
- pyenchant >=3.1.1
- pypandoc *
- requests *
- sphinx >=4,<4.0.3
- sphinx-autodoc-annotation *
- sphinx-autodoc-typehints >=1.10.3
- sphinx-click >=3.0.1
- sphinx-paramlinks *
- sphinx_copybutton *
- sphinx_gallery >=0.8.2
- sphinx_last_updated_by_git *
- sphinx_rtd_theme *
- sphinxcontrib-bibtex >=2.1.0
- sphinxcontrib-spelling *
- actions/cache v2 composite
- actions/checkout v3 composite
- actions/download-artifact v2 composite
- actions/setup-python v2 composite
- actions/setup-python v4 composite
- actions/upload-artifact v2 composite
- github/codeql-action/analyze v2 composite
- github/codeql-action/autobuild v2 composite
- github/codeql-action/init v2 composite
- mstachniuk/ci-skip master composite
- pypa/cibuildwheel v2.0.0a4 composite
- pypa/gh-action-pypi-publish master composite