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GitHub / geneontology / go-pombase
Code for generating process-centric GO-CAM models from GAFs
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/geneontology%2Fgo-pombase
Stars: 0
Forks: 0
Open Issues: 7
License: None
Language: Python
Repo Size: 68.4 KB
Dependencies:
35
Created: over 6 years ago
Updated: 6 months ago
Last pushed: 6 months ago
Last synced: 6 months ago
Topics: gaf, geneontology, go-cam, noctua-models, pathways
Files
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Readme
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Dependencies
requirements.txt
pypi
- Click ==7.0
- PyYAML ==3.13
- SPARQLWrapper ==1.8.2
- argh ==0.26.2
- attrs ==17.4.0
- cachier ==1.2.4
- certifi ==2018.11.29
- chardet ==3.0.4
- decorator ==4.3.0
- gocamgen ==0.0.4
- idna ==2.8
- isodate ==0.6.0
- jsobject ==0.10.2
- marshmallow ==3.0.0b3
- networkx ==1.11
- numpy ==1.15.4
- ontobio ==1.6.3
- pandas ==0.23.4
- pathtools ==0.1.2
- pluggy ==0.6.0
- portalocker ==1.3.0
- prefixcommons ==0.1.7
- py ==1.7.0
- pyparsing ==2.3.0
- pysolr ==3.8.1
- pytest ==3.4.0
- python-dateutil ==2.7.5
- pytz ==2018.9
- rdflib ==4.2.2
- requests ==2.21.0
- scipy ==1.2.0
- six ==1.12.0
- urllib3 ==1.24.1
- watchdog ==0.9.0
- yamldown ==0.1.4