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GitHub / gibbslab / exp2flux
An R package to incorporate in a continuous way the gene-expression data as FBA flux boundaries in a metabolic model. Also, functions to calculate and plot the differences between model fluxes in different metabolic scenarios was included. This is an implementation of the algorithm described by Lee et al. (2012) in DOI: 10.1186/1752-0509-6-73.
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/gibbslab%2Fexp2flux
Stars: 2
Forks: 0
Open Issues: 0
License: None
Language: R
Repo Size: 1.19 MB
Dependencies: pending
Created: almost 8 years ago
Updated: 7 months ago
Last pushed: about 7 years ago
Last synced: 7 months ago
Topics: bioinformatics, fba-fluxes, flux-balance-analysis, gene-expression, metabolic-models, metabolic-network, metabolism