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GitHub / hansenlab / bsseq
Devel repository for bsseq
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hansenlab%2Fbsseq
Stars: 34
Forks: 25
Open Issues: 66
License: None
Language: R
Repo Size: 48.8 MB
Dependencies:
48
Created: about 10 years ago
Updated: 14 days ago
Last pushed: 14 days ago
Last synced: 5 days ago
Commit Stats
Commits: 484
Authors: 27
Mean commits per author: 17.93
Development Distribution Score: 0.717
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/hansenlab/bsseq
Files
Dependencies
- BiocGenerics * depends
- GenomicRanges >= 1.41.5 depends
- R >= 4.0 depends
- SummarizedExperiment >= 1.19.5 depends
- methods * depends
- BSgenome * imports
- Biobase * imports
- BiocParallel * imports
- Biostrings * imports
- DelayedArray >= 0.15.16 imports
- DelayedMatrixStats >= 1.5.2 imports
- GenomeInfoDb * imports
- HDF5Array >= 1.19.11 imports
- IRanges >= 2.23.9 imports
- R.utils >= 2.0.0 imports
- Rcpp * imports
- S4Vectors >= 0.27.12 imports
- data.table >= 1.11.8 imports
- graphics * imports
- gtools * imports
- limma * imports
- locfit * imports
- permute * imports
- rhdf5 * imports
- scales * imports
- stats * imports
- utils * imports
- BSgenome.Hsapiens.UCSC.hg38 * suggests
- BatchJobs * suggests
- BiocStyle * suggests
- Matrix * suggests
- beachmat >= 1.5.2 suggests
- bsseqData * suggests
- doParallel * suggests
- knitr * suggests
- rmarkdown * suggests
- rtracklayer * suggests
- testthat * suggests
- JamesIves/github-pages-deploy-action releases/v4 composite
- actions/cache v3 composite
- actions/checkout v3 composite
- actions/upload-artifact master composite
- docker/build-push-action v4 composite
- docker/login-action v2 composite
- docker/setup-buildx-action v2 composite
- docker/setup-qemu-action v2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite