Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / ibn-salem / sevenC
7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ibn-salem%2FsevenC
Stars: 12
Forks: 2
Open Issues: 0
License: None
Language: R
Repo Size: 26.8 MB
Dependencies:
19
Created: over 7 years ago
Updated: 2 months ago
Last pushed: over 5 years ago
Last synced: about 1 month ago
Topics: 3d-genome, chip-seq, chromatin-interaction, hi-c, prediction, r-package, sequence-motif, transcription-factors
Files
Dependencies
- InteractionSet >= 1.2.0 depends
- R >= 3.5 depends
- BiocGenerics >= 0.22.0 imports
- GenomeInfoDb >= 1.12.2 imports
- GenomicRanges >= 1.28.5 imports
- IRanges >= 2.10.3 imports
- S4Vectors >= 0.14.4 imports
- boot >= 1.3 imports
- data.table >= 1.10.4 imports
- methods >= 3.4.1 imports
- purrr >= 0.2.2 imports
- readr >= 1.1.0 imports
- rtracklayer >= 1.34.1 imports
- BiocStyle * suggests
- GenomicInteractions * suggests
- covr * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests