GitHub topics: sequence-motif
althonos/lightmotif
A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
Language: Rust - Size: 2.39 MB - Last synced at: 20 days ago - Pushed at: about 2 months ago - Stars: 43 - Forks: 2
althonos/pymemesuite
Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.
Language: Cython - Size: 23.7 MB - Last synced at: 1 day ago - Pushed at: 2 months ago - Stars: 13 - Forks: 0
ibn-salem/sevenC
7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs
Language: R - Size: 26.8 MB - Last synced at: 12 months ago - Pushed at: over 6 years ago - Stars: 12 - Forks: 2
shuzhenkuang/DeepLncCTCF
DeepLncCTCF for identification and analysis of consensus RNA motifs binding to the genome regulator CTCF
Language: Python - Size: 123 MB - Last synced at: over 1 year ago - Pushed at: over 4 years ago - Stars: 0 - Forks: 0
kkdey/Logolas
R package for Enrichment Depletion Logos (EDLogos) and String Logos
Language: R - Size: 21.6 MB - Last synced at: over 1 year ago - Pushed at: over 6 years ago - Stars: 26 - Forks: 1
naturale0/MotifOccur
calculates probability of k-mer motif occurrence in n ntd random sequence
Language: Python - Size: 34.2 KB - Last synced at: 2 months ago - Pushed at: over 6 years ago - Stars: 0 - Forks: 0
