GitHub topics: pssm
althonos/lightmotif
A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
Language: Rust - Size: 2.43 MB - Last synced at: 20 days ago - Pushed at: 20 days ago - Stars: 53 - Forks: 2
DeepRank/Deeprank-GNN 📦
Graph Network for protein-protein interface
Language: Python - Size: 96 MB - Last synced at: 9 days ago - Pushed at: over 1 year ago - Stars: 120 - Forks: 32
raghavagps/afpropred
AfProPred: A tool to predict anti-freezing proteins
Language: Python - Size: 89.8 KB - Last synced at: 2 months ago - Pushed at: 11 months ago - Stars: 1 - Forks: 0
d-wdj/KB8024 📦
[SU/VT17] KB8024 - Protein Predictor Project (SupervisedMachineLearning)
Language: Python - Size: 95.1 MB - Last synced at: about 1 year ago - Pushed at: over 7 years ago - Stars: 1 - Forks: 0
koualab/conodictor
ConoDictor predicts conopeptides superfamily using generalized profiles and hidden Markov models.
Language: Python - Size: 90.3 MB - Last synced at: 3 days ago - Pushed at: about 1 year ago - Stars: 2 - Forks: 2
zahrasalarian/Bioinformatics-Projects
Several small Bioinformatics projects implementing related algorithms, including Semi-Global alignment, Multiple Sequence Alignment using Star-Alignment, and MSA using PSSM profiles considering Gaps.
Language: Python - Size: 9.77 KB - Last synced at: almost 2 years ago - Pushed at: almost 2 years ago - Stars: 8 - Forks: 0
gozsari/PSSMs-SwissProt
This repository contains the link for all Position Specific Scoring Matrices(PSSMs) of all protein in SwissProt(UniProtKB)
Size: 177 KB - Last synced at: almost 2 years ago - Pushed at: over 3 years ago - Stars: 3 - Forks: 0
rokuz/GraphicsDemo
Deprecated: Framework to create graphics demos using Direct3D 11 and OpenGL 4+
Language: GLSL - Size: 157 MB - Last synced at: over 1 year ago - Pushed at: over 2 years ago - Stars: 0 - Forks: 0
autosome-ru/motif_benchmarks
Benchmarks collection for GRECO TFBS Benchmarking Initiative
Language: C - Size: 5.42 MB - Last synced at: over 1 year ago - Pushed at: about 2 years ago - Stars: 3 - Forks: 0
baliga-lab/sequencelogo.js
Simple Javascript library for motif rendering
Language: JavaScript - Size: 203 KB - Last synced at: about 1 month ago - Pushed at: over 4 years ago - Stars: 9 - Forks: 3
3dbionotes-community/3DCONS
Ruby on Rails web server
Language: JavaScript - Size: 1.14 MB - Last synced at: over 1 year ago - Pushed at: almost 5 years ago - Stars: 0 - Forks: 0
mingzhangyang/pssm-tools
A collection of tools for visualizing PSSM
Language: JavaScript - Size: 35.2 KB - Last synced at: over 2 years ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 0
bioinsilico/3DCONS
Ruby on Rails web server
Language: JavaScript - Size: 1.14 MB - Last synced at: 2 months ago - Pushed at: over 5 years ago - Stars: 0 - Forks: 1
