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GitHub / janelia-flyem / gala
Automatic segmentation of electron microscopy volumes
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/janelia-flyem%2Fgala
Stars: 73
Forks: 28
Open Issues: 18
License: bsd-3-clause
Language: Python
Repo Size: 70.7 MB
Dependencies:
39
Created: over 11 years ago
Updated: about 2 months ago
Last pushed: over 3 years ago
Last synced: about 1 month ago
Files
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Dependencies
environment.yml
conda
- coverage >=4.0
- cython >=0.25*
- h5py >=2.6*
- jupyter >=1.0*
- line_profiler >=1.1
- matplotlib >=1.5*
- memory_profiler >=0.41
- networkx >=1.10,<2.0
- nose >=1.3
- numpy >=1.11*
- numpydoc >=0.5*
- pytest >=3*
- pytest-cov >=2.2
- python >=3.6*
- pyzmq >=15.*
- scikit-image >=0.12*
- scikit-learn >=0.17*
- scipy >=0.17*
- setuptools >=19.6*
- tqdm >=4.7
- viridis >=0.4
requirements.txt
pypi
- coverage >=4.0
- cython >=0.17
- h5py >=2.6
- joblib >=1.0
- networkx >=2.0
- nose >=1.3
- numpy >=1.14
- numpydoc >=0.5
- pillow >=2.7.0
- pytest >=4
- pytest-cov >=2.2
- pyzmq >=14.7
- scikit-image >=0.17
- scikit-learn >=0.20
- scipy >=1.0
- setuptools >=19.6
- tqdm >=4.7
- viridis >=0.5