Ecosyste.ms: Repos
An open API service providing repository metadata for many open source software ecosystems.
GitHub / jbloomlab / pdb_prot_align
Align proteins to chains in PDB structures
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/jbloomlab%2Fpdb_prot_align
Stars: 6
Forks: 1
Open Issues: 0
License: other
Language: Jupyter Notebook
Repo Size: 8.48 MB
Dependencies:
30
Created: over 4 years ago
Updated: 2 months ago
Last pushed: almost 4 years ago
Last synced: 10 days ago
Files
Loading...
Readme
Loading...
Dependencies
environment.yml
conda
- jupyter
- jupyter_nbextensions_configurator
- jupyterlab
- mafft 7.407.*
- nglview
- nodejs
- pip
- pymol
- python 3.7.*
- ipykernel >=5.1.0
- matplotlib >=3.0.2
- nbsphinx >=0.4.2
- nbsphinx-link >=1.2.0
- sphinx >=2.0
- sphinx-argparse >=0.2.5
- sphinx_gallery >=0.3.1
setup.py
pypi
- biopython >=1.74
- matplotlib >=3.1
- natsort >=6.0.0
- pandas >=0.25.3
- flake8 * test
- flake8-bugbear * test
- flake8-builtins * test
- flake8-comprehensions * test
- flake8-docstrings * test
- flake8-import-order * test
- flake8-print * test
- flake8-rst-docstrings * test
- nbval * test
- pytest * test