GitHub / kGorze / RNA-Seq-Nextflow
A reproducible, scalable, and containerized RNA-Seq analysis pipeline implemented in Nextflow. Features modular design with quality control (FastQC/MultiQC), alignment (STAR/HISAT2), quantification (Salmon/featureCounts), and differential expression analysis (DESeq2) components. Includes Docker containerization and CI/CD with GitHub Actions.
JSON API: http://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kGorze%2FRNA-Seq-Nextflow
PURL: pkg:github/kGorze/RNA-Seq-Nextflow
Stars: 0
Forks: 0
Open issues: 4
License: None
Language: HTML
Size: 8.63 MB
Dependencies parsed at: Pending
Created at: 4 months ago
Updated at: 4 months ago
Pushed at: 4 months ago
Last synced at: 4 months ago
Topics: bioinformatics, differential-expression, docker, nextflow, pipeline, rna-seq