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GitHub / kmayerb / tcrdist2
Quantifiable predictive features define epitope-specific T cell receptor repertoires
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/kmayerb%2Ftcrdist2
Stars: 14
Forks: 3
Open Issues: 22
License: other
Language: Python
Repo Size: 8.44 MB
Dependencies:
152
Created: about 5 years ago
Updated: over 2 years ago
Last pushed: over 1 year ago
Last synced: about 1 year ago
Files
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Readme
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Dependencies
- fishersapi *
- future ==0.17.1
- hierdiff *
- matplotlib ==3.0.3
- numba *
- numpy ==1.16.2
- pandas ==0.24.2
- parasail *
- pwseqdist *
- scikit-learn ==0.20.3
- scipy ==1.2.1
- seaborn ==0.9.0
- sphinx_rtd_theme *
- statsmodels ==0.10.1
- tables *
- zipdist *
requirements-dev.txt
pypi
- Jinja2 ==2.10.1 development
- MarkupSafe ==1.1.1 development
- Pygments ==2.4.2 development
- Send2Trash ==1.5.0 development
- appnope ==0.1.0 development
- atomicwrites ==1.3.0 development
- attrs ==19.1.0 development
- backports-abc ==0.5 development
- backports.shutil-get-terminal-size ==1.0.0 development
- bleach ==3.1.4 development
- certifi ==2019.3.9 development
- configparser ==3.7.4 development
- contextlib2 ==0.5.5 development
- decorator ==4.4.0 development
- defusedxml ==0.6.0 development
- entrypoints ==0.3 development
- enum34 ==1.1.6 development
- fishersapi * development
- funcsigs ==1.0.2 development
- functools32 ==3.2.3.post2 development
- futures ==3.2.0 development
- hierdiff * development
- html5lib ==1.0.1 development
- importlib-metadata ==0.17 development
- ipaddress ==1.0.22 development
- ipykernel ==4.10.0 development
- ipython ==5.8.0 development
- ipython-genutils ==0.2.0 development
- ipywidgets ==7.4.2 development
- jsonschema ==3.0.1 development
- jupyter ==1.0.0 development
- jupyter-client ==5.2.4 development
- jupyter-console ==5.2.0 development
- jupyter-core ==4.4.0 development
- jupyterlab ==0.33.11 development
- jupyterlab-launcher ==0.11.2 development
- matplotlib ==1.4.3 development
- mistune ==0.8.4 development
- more-itertools ==5.0.0 development
- nbconvert ==5.5.0 development
- nbformat ==4.4.0 development
- notebook ==5.7.8 development
- numpy ==1.10.1 development
- packaging ==19.0 development
- pandas ==0.20.3 development
- pandocfilters ==1.4.2 development
- parasail ==1.1.16 development
- parmap * development
- pathlib2 ==2.3.3 development
- pexpect ==4.7.0 development
- pickleshare ==0.7.5 development
- pluggy ==0.12.0 development
- prometheus-client ==0.6.0 development
- prompt-toolkit ==1.0.15 development
- ptyprocess ==0.6.0 development
- pwseqdist * development
- py ==1.8.0 development
- pyparsing ==2.0.3 development
- pyrsistent ==0.14.11 development
- pytest ==4.6.2 development
- python-dateutil ==2.8.0 development
- pytz ==2019.1 development
- pyzmq ==18.0.0 development
- qtconsole ==4.5.1 development
- scandir ==1.10.0 development
- scikit-learn >=0.23 development
- scipy ==0.16.0 development
- simplegeneric ==0.8.1 development
- singledispatch ==3.4.0.3 development
- six ==1.12.0 development
- statsmodels ==0.10.1 development
- subprocess32 ==3.5.4 development
- terminado ==0.8.2 development
- testpath ==0.4.2 development
- tornado ==5.1.1 development
- traitlets ==4.3.2 development
- wcwidth ==0.1.7 development
- webencodings ==0.5.1 development
- widgetsnbextension ==3.4.2 development
- zipp ==0.5.1 development
requirements.txt
pypi
- escapejson *
- fishersapi ==0.2
- future >=0.17.1
- hierdiff ==0.2
- matplotlib ==3.0.3
- numba *
- numpy ==1.18.1
- pandas ==1.0.3
- parasail ==1.2
- parmap *
- pwseqdist ==0.1
- pytest ==5.4.1
- scikit-learn >=0.23
- scipy ==1.4.1
- seaborn >=0.9.0
- statsmodels >=0.10.1
- tables *
- tcrsampler ==0.1.7
- zipdist ==0.1.5
requirements36.txt
pypi
- escapejson *
- fishersapi ==0.2
- future ==0.17.1
- hierdiff ==0.2
- matplotlib ==3.0.3
- numba *
- numpy ==1.16.2
- pandas ==0.24.2
- parasail *
- parmap *
- pwseqdist ==0.1
- scikit-learn >=0.23
- scipy ==1.2.1
- seaborn ==0.9.0
- statsmodels ==0.10.1
- tables *
- tcrsampler ==0.1.7
- zipdist ==0.1.5
requirements37.txt
pypi
- escapejson *
- fishersapi ==0.2
- future >=0.17.1
- hierdiff ==0.2
- matplotlib ==3.0.3
- numba *
- numpy ==1.18.1
- pandas ==1.0.3
- parasail ==1.2
- parmap *
- pwseqdist ==0.1
- pytest ==5.4.1
- scikit-learn >=0.23
- scipy ==1.4.1
- seaborn >=0.9.0
- statsmodels >=0.10.1
- tables *
- tcrsampler ==0.1.7
- zipdist ==0.1.5