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GitHub / mbhall88 / rasusa
Randomly subsample sequencing reads
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/mbhall88%2Frasusa
Stars: 186
Forks: 16
Open Issues: 3
License: mit
Language: Rust
Repo Size: 13.3 MB
Dependencies:
119
Created: over 4 years ago
Updated: about 1 month ago
Last pushed: about 1 month ago
Last synced: 30 days ago
Commit Stats
Commits: 196
Authors: 5
Mean commits per author: 39.2
Development Distribution Score: 0.255
More commit stats: https://commits.ecosyste.ms/hosts/GitHub/repositories/mbhall88/rasusa
Topics: alignment, bam, bioinformatics, coverage, downsample, fasta, fastq, genome-analysis, random, rust, subsampling
Files
Dependencies
- assert_cmd 0.10 development
- predicates 1 development
- tempfile 3.1.0 development
- anyhow 1.0
- chrono 0.4
- clap 3.2.8
- fern 0.5
- log 0.4
- needletail 0.4.1
- niffler 2.3
- rand 0.7.2
- rand_pcg 0.2.1
- regex 1.5.5
- thiserror 1.0
- actions-rs/cargo v1 composite
- actions-rs/toolchain v1 composite
- actions/checkout v2 composite
- actions/upload-artifact master composite
- softprops/action-gh-release 59c3b4891632ff9a897f99a91d7bc557467a3a22 composite
- actions-rs/cargo v1 composite
- actions-rs/tarpaulin v0.1 composite
- actions-rs/toolchain v1 composite
- actions/cache v2 composite
- actions/checkout v2 composite
- actions/upload-artifact v1 composite
- codecov/codecov-action v1 composite
- adler 1.0.2
- aho-corasick 0.7.18
- anyhow 1.0.58
- assert_cmd 0.10.2
- atty 0.2.14
- autocfg 1.1.0
- bgzip 0.2.1
- bitflags 1.3.2
- buf_redux 0.8.4
- bytecount 0.6.3
- bzip2 0.4.3
- bzip2-sys 0.1.11+1.0.8
- cc 1.0.73
- cfg-if 1.0.0
- chrono 0.4.19
- clap 3.2.8
- clap_derive 3.2.7
- clap_lex 0.2.4
- colored 1.9.3
- crc32fast 1.3.2
- difference 2.0.0
- escargot 0.3.1
- fastrand 1.7.0
- fern 0.5.9
- flate2 1.0.24
- float-cmp 0.8.0
- getrandom 0.1.16
- hashbrown 0.12.1
- heck 0.4.0
- hermit-abi 0.1.19
- indexmap 1.9.1
- instant 0.1.12
- itoa 1.0.2
- jobserver 0.1.24
- lazy_static 1.4.0
- libc 0.2.126
- log 0.4.17
- lzma-sys 0.1.19
- memchr 2.5.0
- miniz_oxide 0.5.3
- needletail 0.4.1
- niffler 2.4.0
- normalize-line-endings 0.3.0
- num-integer 0.1.45
- num-traits 0.2.15
- once_cell 1.12.1
- os_str_bytes 6.1.0
- pkg-config 0.3.25
- ppv-lite86 0.2.16
- predicates 1.0.8
- predicates-core 1.0.3
- predicates-tree 1.0.5
- proc-macro-error 1.0.4
- proc-macro-error-attr 1.0.4
- proc-macro2 1.0.40
- quote 1.0.20
- rand 0.7.3
- rand_chacha 0.2.2
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- rand_hc 0.2.0
- rand_pcg 0.2.1
- redox_syscall 0.2.13
- regex 1.5.6
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- strsim 0.10.0
- syn 1.0.98
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- termcolor 1.1.3
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- textwrap 0.15.0
- thiserror 1.0.31
- thiserror-impl 1.0.31
- time 0.1.44
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- wasi 0.10.0+wasi-snapshot-preview1
- winapi 0.3.9
- winapi-i686-pc-windows-gnu 0.4.0
- winapi-util 0.1.5
- winapi-x86_64-pc-windows-gnu 0.4.0
- xz2 0.1.7
- zstd 0.7.0+zstd.1.4.9
- zstd-safe 3.1.0+zstd.1.4.9
- zstd-sys 1.5.0+zstd.1.4.9