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GitHub / nhoffman / dada2-nf
A Nextflow pipeline for processing 16S rRNA sequences using dada2
JSON API: https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/nhoffman%2Fdada2-nf
Stars: 0
Forks: 2
Open Issues: 9
License: None
Language: Python
Repo Size: 22.2 MB
Dependencies:
13
Created: over 4 years ago
Updated: over 2 years ago
Last pushed: 4 months ago
Last synced: 4 months ago
Files
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Readme
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Dependencies
- barcodecop ==0.5
- biopython *
- openpyxl ==3.0.9
- actions/checkout v3 composite
- actions/setup-java v2 composite
- docker/build-push-action v3 composite
- docker/login-action v1 composite
- docker/setup-buildx-action v1 composite
docker/Dockerfile
docker
- rocker/r-ubuntu 22.04 build
- barcodecop *
- biopython *
- cutadapt *
- openpyxl *